| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 519,677 | T→C | 5.7% | intergenic (+31/‑69) | argC → / → erpA | N‑acetyl‑gamma‑glutamyl‑phosphate reductase/iron‑sulfur cluster insertion protein ErpA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 519,677 | 0 | T | C | 5.7% | 258.5 / 4.2 | 87 | intergenic (+31/‑69) | argC/erpA | N‑acetyl‑gamma‑glutamyl‑phosphate reductase/iron‑sulfur cluster insertion protein ErpA |
| Reads supporting (aligned to +/- strand): ref base T (39/43); new base C (3/2); total (42/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.17e-01 | |||||||||||
GGTGATCGACAACCTGGTCAAGGGTGCCTCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCTACCGCGCCGGGAGAATCAACATGAGCGTCGAAACCTTCACCCCTACCGGT > NC_002947/519535‑519823 | ggTGATCGACAACCTGGTCAAGGGTGCCTCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑c > 2:241363/1‑149 (MQ=255) aTCGACAACCTGGTCAAGGGTGCCTCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCttt > 7:151004/1‑149 (MQ=255) atccgatcTGTTCAAGGGTGCCTCCGTCCATGCGGTGCAGAAACTCAACATTCTGTTCGGTGTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGTCCGCCAGGATTGGAAAAGGCCCTCGTCGTGCGGG‑CCtt < 5:213648/139‑1 (MQ=255) gACAACCTGGTCAAGGGTGCCTCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTg < 1:241363/149‑1 (MQ=255) gACAACCTGGTCAAGGGTGCCTCCGGCCAGGCGGTGCAGAACCTCAACATTATGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGACAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTg > 8:167842/1‑149 (MQ=255) cAACCTGGTCAAGGGTGCCTCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCACGACGCGGG‑CCttttccaa < 3:222509/149‑5 (MQ=255) aaCCTGGTCAAGGGTGCCTCCGGCCAGTCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGCTGAGCGCATGGGCCTGTCCCATGGCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGTCCCGCGTCGTGCGGG‑CCTTTTTGCAg < 7:145855/149‑1 (MQ=255) aaCCTGGTCAAGGGTGCCTCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAg > 7:34230/1‑149 (MQ=255) ccTGGTCAAGGGTGCCTCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTGGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCACGACGCGGG‑CCttttc < 2:155654/143‑2 (MQ=255) ccTGGTCAAGGGTGCCTCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAgg > 2:221011/1‑148 (MQ=255) ccTGGTCAAGGGTGCCTCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGt < 2:249167/149‑1 (MQ=255) ccTGGTCAAGGGTGCCTCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCACGACGCGGG‑CCttttc > 1:155654/1‑142 (MQ=255) cTGGTCAAGGGTGCCTCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTc > 2:292803/1‑149 (MQ=255) tGGTCAAGGGTGCCTCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTcg > 1:93410/1‑149 (MQ=255) gTCAAGGGTGCCTCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCttt > 1:10078/1‑137 (MQ=255) gTCAAGGGTGCCTCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCttt < 2:10078/137‑1 (MQ=255) gTCAAGGGTGCCTCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTcgcg < 8:199651/149‑1 (MQ=255) gTCAAGGGTGCCTCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTcgc < 1:162922/148‑1 (MQ=255) gTCAAGGGTGCCTCCGGCCAGGAGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGACGCCAGAATTGGAAAAGTCCCGCGTCGTGCGGG‑CCtt > 6:213648/1‑136 (MQ=255) ggTGCCTCCGGCCAGGCGGTGCAGAACCTCAAGATTCTTTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTaaa < 4:171851/149‑1 (MQ=255) gTGCCTCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAg > 2:336422/1‑149 (MQ=255) gTGCCTCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAg < 8:34230/149‑1 (MQ=255) cTCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGa > 4:5960/1‑139 (MQ=255) cTCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGa < 3:5960/139‑1 (MQ=255) tCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGca > 7:56190/1‑149 (MQ=255) tCCGGCCAGGCGGTGCAGAACCTCAACATTCTCTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGca > 7:63808/1‑149 (MQ=255) aGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGGCCCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTc < 1:221011/149‑1 (MQ=255) gCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCtt > 2:244095/1‑148 (MQ=255) cAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGAt > 6:90397/1‑149 (MQ=255) aGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAgg < 7:118229/116‑1 (MQ=255) aGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAgg > 8:118229/1‑116 (MQ=255) gAACCTCAACATCCTGTTCGGGCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCGGCCGTAAGGCCGCCAGCATTCGAAACGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGGCGCGACTAAAGCCGCACAATTCTTGACCGAttt < 5:340762/149‑1 (MQ=255) cTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTtctc < 8:27784/149‑1 (MQ=255) cTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTtctc > 7:69324/1‑149 (MQ=255) taCATTCTGTTCGGTCCGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCg < 4:111994/146‑1 (MQ=255) aaCATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGTCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTc > 3:288695/1‑131 (MQ=255) aaCATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGTCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTc < 4:288695/131‑1 (MQ=255) aaCATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCgg < 8:151004/148‑1 (MQ=255) aaCATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCg < 1:292803/147‑1 (MQ=255) aTTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCgg < 6:218215/145‑1 (MQ=255) aTTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCgg > 5:218215/1‑145 (MQ=255) cTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGc < 5:90397/148‑1 (MQ=255) cTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGc < 8:56190/148‑1 (MQ=255) cTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGc < 1:108599/148‑1 (MQ=255) ttCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGa > 3:46392/1‑148 (MQ=255) gTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCg > 3:14160/1‑134 (MQ=255) gTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCg < 4:14160/134‑1 (MQ=255) gTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATg < 4:46392/149‑1 (MQ=255) gTCTGGATGAGCGCATGGGCCTGTCCCATGCCCGCTTGCTGCCATAAGGCCGCCAGGATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCTACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATg > 6:166511/1‑149 (MQ=255) tCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATgc < 6:58392/149‑1 (MQ=255) gATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGc > 6:290491/1‑136 (MQ=255) gATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGc < 5:290491/136‑1 (MQ=255) cgcATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGa < 4:186966/149‑1 (MQ=255) gcATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATgcgc > 1:96126/1‑140 (MQ=255) gcATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATgcgc < 2:96126/140‑1 (MQ=255) cATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGCGt < 4:157513/149‑1 (MQ=255) aTGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGtt < 2:93410/149‑1 (MQ=255) tGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCATGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGttt < 1:244095/149‑1 (MQ=255) gcTGTCCCATGCCGGCTTGCTGCCGTAAGGCATCCAGCATTGGAAAAGGCCGGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCTCAATTCTTGAACGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTAt < 5:313965/147‑1 (MQ=255) tGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATggc < 8:63808/149‑1 (MQ=255) ccATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATggcggc > 3:255361/1‑148 (MQ=255) cATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCtt > 7:53608/1‑94 (MQ=255) cATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCtt < 8:53608/94‑1 (MQ=255) cATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTAt < 2:185380/141‑1 (MQ=255) cATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTAt > 1:185380/1‑141 (MQ=255) tGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCTAcc > 3:170666/1‑149 (MQ=255) ccGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCTACcgc > 1:83157/1‑149 (MQ=255) cGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTAt > 6:247179/1‑136 (MQ=255) cGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTAt < 5:247179/136‑1 (MQ=255) cGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCTACCGCGCCGGGAGAAt < 7:167842/148‑1 (MQ=255) tAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCTACCGCGCCGGGAGAATCaa > 6:127938/1‑149 (MQ=255) tAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCTACCGCGCCGGGAGAATCaa < 2:83157/149‑1 (MQ=255) gccgccAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCTACCGCGCCGGGAGAATCAACAt > 8:262001/1‑148 (MQ=255) aTTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCTACCGCGCCGGGAGAATCAACATGAGCGTCGaa > 5:218282/1‑149 (MQ=255) aTTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCTACCGCGCCGGGAGAATCAACATGAGCGTCGa > 5:213392/1‑148 (MQ=255) tgcaaaaaGGCCCGCACGACGCGGG‑CCTTTTCGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAGTGCGCGTCATCGAGTTTTATGGCGGCTCCCGCGCCGGGAGAATCCGCATGAGCGTCgcgc > 6:167741/5‑146 (MQ=255) tGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCTACCGCGCCGGGAGAATCAACATGAGCGTCGAAAc > 1:325168/1‑149 (MQ=255) ggAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCTACCGCGCCGGGAGAATCAACATGAGCGTCGAAAcc > 5:195904/1‑149 (MQ=255) gAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCt > 3:282827/1‑113 (MQ=255) gAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCt < 4:282827/113‑1 (MQ=255) gAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCTACCGCGCCGGGAGAATCAACATGAGCGTCGAAAcc > 4:298844/1‑148 (MQ=255) gAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCTACCGCGCCGGGAGAATCAACATGAGCGTCGAAACCt < 7:78324/149‑1 (MQ=255) aaaaaGGCCCGCACGACGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCTACCGCGCCGGGAGAATCAACATGAGCGTCGAAACCt > 7:94558/2‑149 (MQ=255) aaaaGGGCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCTACCGCGCCGGGAGAATCAACATGAGCGTCGAAACCtt < 3:298844/149‑1 (MQ=255) aaaGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCTACCGCGCCGGGAGAATCAACATGAGCGTCGAAACCTTc < 6:195904/149‑1 (MQ=255) gCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCTACCGCGCCGGGAGAATCAACATGAGCGTCGAAACCTTCAccc < 1:336422/149‑1 (MQ=255) ccGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCTACCGCGCCGGGAGAATCAACATGAGCGTCGAAACCTTCAcccc > 5:198406/1‑148 (MQ=255) gtGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCTACCGCGCCGGGAGAATCAACATGAGCGTCGAAACCTTCACCCCTACCGGt < 6:198406/148‑1 (MQ=255) | GGTGATCGACAACCTGGTCAAGGGTGCCTCCGGCCAGGCGGTGCAGAACCTCAACATTCTGTTCGGTCTGGATGAGCGCATGGGCCTGTCCCATGCCGGCTTGCTGCCGTAAGGCCGCCAGCATTGGAAAAGGCCCGCGTCGTGCGGG‑CCTTTTTGCAGGTCGCGACTAAAGCCGCACAATTCTTGACCGATTTTCTCGGGAAAGCGGATAATGCGCGTCATCGAGTTTTATGGCGGCTACCGCGCCGGGAGAATCAACATGAGCGTCGAAACCTTCACCCCTACCGGT > NC_002947/519535‑519823 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |