| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 538,397 | A→G | 10.5% | I259V (ATC→GTC) | rpoB → | DNA‑directed RNA polymerase subunit beta |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 538,397 | 0 | A | G | 10.5% | 173.9 / 8.9 | 66 | I259V (ATC→GTC) | rpoB | DNA‑directed RNA polymerase subunit beta |
| Reads supporting (aligned to +/- strand): ref base A (28/31); new base G (3/4); total (31/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
GCCTCGGTGCTGCTGCGCGCCCTGGGTTACAGCACTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCAAGCAACTGGACGTTCCAATGGAATACGTCCTGGGCCGCACTACCGCCAAGGCTATCGTGCA > NC_002947/538250‑538545 | gCCTCGGTGCTGCTGCGCGCCCTGGGTTAGAGCACTGAAGAAGTGCTGAACACCTTCTACACCAACAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACAt < 4:103684/149‑1 (MQ=255)gCCTCGGTGCTGCTGCGCGCCCTGGGTTACAGCACTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACAt < 8:232172/149‑1 (MQ=255) ccTCGGTGCTGCTGCGCGCCCTGGGTTACAGCACTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATc < 3:106245/149‑1 (MQ=255) cTCGGTGCTGCTGCGCGCCCTGGGTTACAGCACTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATcc < 5:191869/149‑1 (MQ=255) cTCGGTGCTGCTGCGCGCCCTGGGTTACAGCACTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATc > 6:97349/1‑148 (MQ=255) gctgctgcGCGCCCTGGGTTACAGCACTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGAc > 1:336090/1‑148 (MQ=255) ctgctgcGCGCCCTGGGTTACAGCACTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGATGTCCATGActg < 1:339837/149‑3 (MQ=255) tgctgcGCGCCCTGGGTTACAGCACTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGa > 1:51427/1‑148 (MQ=255) tgctgcGCGCCCTGGGTTACAGCACTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGa > 6:80429/1‑148 (MQ=255) ctgcGCGCCCTGGGTTACAGCACTTAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGaaa < 5:23822/148‑1 (MQ=255) tgcGCGCCCTGGGTTACAGCACTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAAcc > 3:75048/1‑149 (MQ=255) gcgcgcCCTGGGTTACAGCACTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGATGTCCATGActgca < 2:143685/146‑5 (MQ=255) gcgcgcCCTGGGTTACAGCACTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGATGTCCATGActgca > 1:143685/1‑142 (MQ=255) cgcgcCCTGGGTTACAGCACTGAAGAAGTGCTGAACACCTTCGACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCgg > 1:241311/1‑149 (MQ=255) gcCCTGGGTTACAGCACTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGATGTCCATGActg < 3:51680/140‑3 (MQ=255) gcCCTCGGTTACAGCACTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGATGTCCATGActg > 4:51680/1‑138 (MQ=255) cccTGGGTTACAGCACTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCaaa < 5:80429/149‑1 (MQ=255) ccTGGGTTACAGCACTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGATGTCCATGAct > 7:302533/1‑136 (MQ=255) ccTGGGTTACAGCACTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGATGTCCATGAct < 8:302533/137‑2 (MQ=255) gTTACAGCACTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCAtc < 5:97349/149‑1 (MQ=255) tACAGCACTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCAtcgt > 4:267985/1‑149 (MQ=255) gCACTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAg < 3:267985/149‑1 (MQ=255) cTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCaa < 7:48168/149‑1 (MQ=255) acacCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTAcc > 3:164408/1‑149 (MQ=255) acacCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTAcc < 7:239200/149‑1 (MQ=255) ccTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAgg < 4:157735/133‑1 (MQ=255) ccTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAgg > 3:157735/1‑133 (MQ=255) cTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACcgcgc > 3:150248/1‑149 (MQ=255) cTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACcgcgc < 2:336090/149‑1 (MQ=255) ttCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACcgcgcg > 7:208221/1‑149 (MQ=255) caccacCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCcac < 2:241311/148‑1 (MQ=255) caccaACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATc > 5:33623/1‑148 (MQ=255) accgACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCaa > 2:12642/1‑149 (MQ=255) ccaACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAAc < 2:51427/149‑1 (MQ=255) caACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCAt < 7:318001/108‑1 (MQ=255) caACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCAt > 8:318001/1‑108 (MQ=255) caACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAAc > 8:53802/1‑148 (MQ=255) aCGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAg > 2:312236/1‑149 (MQ=255) acaTTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAg < 4:164408/149‑1 (MQ=255) acaTTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAg > 1:93934/1‑149 (MQ=255) cGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAg > 8:96600/1‑142 (MQ=255) cGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAg < 7:96600/142‑1 (MQ=255) cGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGc < 7:174056/148‑1 (MQ=255) gCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGt > 2:78341/1‑148 (MQ=255) gCGAAAAACTCAGCCTGGAACTGGTACCGCAGAGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTc < 1:53702/149‑1 (MQ=255) gAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCaa > 5:292732/1‑149 (MQ=255) aaaaaCTCAGCCTGGGACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCAAg < 1:40679/149‑1 (MQ=255) aaaaaCTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCTCATCAACCAGCTCGAGAAGGCCGGCGTCAAg < 1:312236/149‑1 (MQ=255) aaaaCTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCAAGc < 6:292732/149‑1 (MQ=255) aCTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCAAGCAAc < 7:53802/149‑1 (MQ=255) cTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCAAGCAACTGGACGt < 4:150248/149‑1 (MQ=255) cTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCAAGCAACTGGACGt > 6:13451/1‑149 (MQ=255) ggAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCAAGCAACTGGACGTTc > 3:61879/1‑149 (MQ=255) cTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCAAGCAACTGGACGTTCCAAt < 1:12642/149‑1 (MQ=255) gTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCTGCGTCAAGCAACTGGACGTTCCAATg < 1:78341/147‑1 (MQ=255) gTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCAAGCAACTGGACGTTCCAATgg > 7:93965/1‑148 (MQ=255) gTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCAAGCAACTGGACGTTCCAATg < 8:208221/147‑1 (MQ=255) ttGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCAAGCAACTGGACGTTCCAATGGAATACGTCCTGGGCCGCACTACCGc > 4:58410/1‑148 (MQ=255) cAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCAAGCAACTGGACGTTCCAATGGAATACGTCCTGGGCCGCACTACCGCCAAg > 4:11289/1‑149 (MQ=255) cAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCCCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCAAGCAACTGGACGTTCCAATGGAATACGTCCTGGGCCGCACTACCGCCaa < 6:33546/148‑1 (MQ=255) aGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCAAGCAACTGGACGTTCCAATGGAATACGTCCTGGGCCGCACTACCGCCAAgg > 6:202677/1‑149 (MQ=255) aGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCAAGCAACTGGACGTTCCAATGGAATACGTCCTGGGCCGCACTACCGCCAAgg < 4:75048/149‑1 (MQ=255) tCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCAAGCAACTGGACGTTCCAATGGAATACGTCCTGGGCCGCACTACCGCCAAGGc > 3:4242/1‑148 (MQ=255) ggACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCAAGCAACTGGACGTTCCAATGGAATACGTCCTGGGCCGCACTACCGCCAAGGCTATCg > 4:129913/1‑149 (MQ=255) gACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCAAGCAACTGGACGTTCCAATGGAATACGTCCTGGGCCGCACTACCGCCAAGGCTATCGt < 2:93934/149‑1 (MQ=255) cATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCAAGCAACTGGACGTTCCAATGGAATACGTCCTGGGCCGCACTACCGCCAAGGCTATCGTGc < 5:202677/149‑1 (MQ=255) aTCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCAAGCAACTGGACGTTCCAATGGAATACGTCCTGGGCCGCACTACCGCCAAGGCTATCGTGCa > 6:18796/1‑149 (MQ=255) | GCCTCGGTGCTGCTGCGCGCCCTGGGTTACAGCACTGAAGAAGTGCTGAACACCTTCTACACCACCAACGTGTTCCACATTTCCGGCGAAAAACTCAGCCTGGAACTGGTACCGCAGCGTCTGCGTGGTGAAGTTGCAGTCATGGACATCCATGACGAAACCGGCAAAGTCATCGTCGAGCAAGGCCGCCGTATTACCGCGCGCCACATCAACCAGCTCGAGAAGGCCGGCGTCAAGCAACTGGACGTTCCAATGGAATACGTCCTGGGCCGCACTACCGCCAAGGCTATCGTGCA > NC_002947/538250‑538545 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |