| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 571,618 | T→C | 6.6% | intergenic (+44/+47) | ssb → / ← PP_0486 | single‑stranded DNA‑binding protein/GntR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 571,618 | 0 | T | C | 6.6% | 211.8 / 4.5 | 75 | intergenic (+44/+47) | ssb/PP_0486 | single‑stranded DNA‑binding protein/GntR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (33/37); new base C (3/2); total (36/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.60e-01 | |||||||||||
AGGCCCAGCGCCCGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAGGGCGAT > NC_002947/571471‑571760 | agGCCCAGCGCCCGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGtt < 8:217102/149‑1 (MQ=255) gcgcCCGCAACAGGCCCCTCAGCGGCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTgg < 1:28561/149‑1 (MQ=255) gcgcCCGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAACTGCCCTgg < 6:91542/149‑1 (MQ=255) ccGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGttt > 5:86376/1‑149 (MQ=255) cAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGtttttt < 3:253722/149‑1 (MQ=255) aGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATg > 1:115924/1‑149 (MQ=255) ggCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATgg < 5:83428/149‑1 (MQ=255) gCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATggg > 3:51037/1‑149 (MQ=255) gCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATggg > 8:302287/1‑149 (MQ=255) ccTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGgcag < 2:115924/149‑1 (MQ=255) ccTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTGCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGgcag < 5:94452/149‑1 (MQ=255) tCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAACTGCCCTGGGtttct < 5:35634/137‑3 (MQ=255) tCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGAAATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAACTGCCCTGGGtttct > 6:35634/1‑135 (MQ=255) cgcccagcgccGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACcgc < 6:86376/149‑1 (MQ=255) gcccagcgccGCAACAGCCTGCGCCGCACCCGGAGGCTGACTTCGACACCTTCGATGACGATATTCCGTTCAGATCAGAGCGGTAGGGCCTACAGCGAGACCAGAAACCCAGGGCACTAGCGCTGGGTATTTTTATCGGCAGCACggcg > 1:33058/1‑149 (MQ=255) cccagcgccGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACcgcg > 7:197897/1‑148 (MQ=255) ccagcgccGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTa > 4:66086/1‑149 (MQ=255) ccagcgccGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTa > 7:150070/1‑149 (MQ=255) agcgccGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATc < 4:51037/149‑1 (MQ=255) cgccgcAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCCACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAg < 4:145344/149‑1 (MQ=255) gcAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCAt > 1:261980/1‑149 (MQ=255) aaCAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCa < 5:232980/142‑1 (MQ=255) aaCAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCa > 6:232980/1‑142 (MQ=255) cAGCCTGCGCCGCAGCCGGCTGCTGACTTCGACAGCATCGATGACGATATTCCGTTCTGATCAGATCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCACTCGGTTTTTTTATCGACAGCACCGCGTATCAGGCATCGCt > 4:69490/1‑149 (MQ=255) cAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCt > 1:297851/1‑149 (MQ=255) gCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCttt < 2:261980/149‑1 (MQ=255) gCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCttt < 5:42017/149‑1 (MQ=255) ccTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGttttt > 2:248422/1‑115 (MQ=255) cTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGTGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCa < 8:85465/149‑1 (MQ=255) tGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAg > 3:318590/1‑149 (MQ=255) gcAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGaac < 3:66086/149‑1 (MQ=255) cggcggCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCATGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCg < 7:242138/149‑1 (MQ=255) ggcggcTGACTTCGACAGCTTCGATGACGATATTGCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTTGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCgg < 3:69490/149‑1 (MQ=255) cTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTc > 5:164424/1‑149 (MQ=255) tGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTcc > 1:168190/1‑149 (MQ=255) gACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCg > 4:315619/1‑149 (MQ=255) cTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGc < 3:208188/149‑1 (MQ=255) ttCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACAAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGc > 8:305556/1‑148 (MQ=255) cGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGCATCAGGCATCGc < 4:152670/119‑1 (MQ=255) cGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGCATCAGGCATCGc > 3:152670/1‑119 (MQ=255) gACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGaa < 2:168190/148‑1 (MQ=255) aCAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATc > 3:228382/1‑149 (MQ=255) cAGCTTCGATGACGATTTTCCTTTCTGATCTGTGCGTTAGGTCGTTCAGCAAGACGAGATACACAGGGCTGTTGCGCTGGGTTTTTTTATGGGCAGCACCGGGTATCAGGCATCGCTTTCAGTTGAACAACCGGGGCTCCGGCGAATcc < 1:269980/149‑1 (MQ=255) aCGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACAGGGGCTCCGGCGAATCCAGCAGGCTTGc > 4:325945/1‑149 (MQ=255) ttCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCtt < 3:315619/149‑1 (MQ=255) ttCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCt < 2:297851/148‑1 (MQ=255) tCCGTTCTGATCAGAGCGGTAGGGAGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGAAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTg > 7:46805/1‑149 (MQ=255) gTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGc < 4:6149/139‑1 (MQ=255) gTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGc > 3:6149/1‑139 (MQ=255) gTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTc < 7:302287/149‑1 (MQ=255) gTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTc < 4:228382/149‑1 (MQ=255) cTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAg < 4:318590/148‑1 (MQ=255) cTGATCAGAGCGGTAGGGCGGTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAg < 7:105949/148‑1 (MQ=255) cGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGAAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTgg < 8:46805/149‑1 (MQ=255) cAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAggg < 1:63023/125‑1 (MQ=255) cAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTATATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAggg > 2:63023/1‑125 (MQ=255) gACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTg > 3:7489/1‑149 (MQ=255) cAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACAGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCATAGCCCAGTTCTTGGCTGCTGGGTGCCa > 5:70811/1‑149 (MQ=255) aaaCCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCa < 6:164424/149‑1 (MQ=255) aCCGAGGGCAGTTGCCCTGGGTTTTTTTATGGGAAGCACCGCGTATCAGGCATCTCTTTCAGTATAACAACCGGGGCTCCGGCGAATCCAGCATGCTTTCCAGCTTGGTCAGGGCAAAGCCCAGTTCtt < 3:196785/129‑1 (MQ=255) aCCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAgg > 1:68015/1‑149 (MQ=255) aCCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGATCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCAAGTTCtt > 4:196785/1‑129 (MQ=255) aCCCAGGGCAACTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGACCACCCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAgg > 1:199103/1‑149 (MQ=255) cccAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCg < 2:215273/72‑1 (MQ=255) cccAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAggg < 8:240266/149‑1 (MQ=255) cccAGGGCAGTTGCCCTGGGTTTTTTTATGGGAAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCg > 1:215273/1‑72 (MQ=255) ccAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAggg > 1:163739/1‑148 (MQ=255) ccAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAggg > 1:158565/1‑148 (MQ=255) ccAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAggg < 2:158565/148‑1 (MQ=255) ccAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAggg < 2:163739/148‑1 (MQ=255) ccAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAGGGc < 8:150070/149‑1 (MQ=255) ccAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAGGGc > 3:285349/1‑149 (MQ=255) ccAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAGGGc > 8:50400/1‑149 (MQ=255) ccAGGGCAACTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAGGGc > 5:53394/1‑149 (MQ=255) gggCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAGGGCGAt < 7:305556/149‑1 (MQ=255) gggCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGGGCCATCAGGGCGAt < 8:197897/149‑1 (MQ=255) | AGGCCCAGCGCCCGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACCCAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAGGGCGAT > NC_002947/571471‑571760 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |