| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 20,139 | T→C | 5.9% | intergenic (+17/‑59) | PP_0015 → / → PP_0016 | transposon protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 20,139 | 0 | T | C | 5.9% | 201.4 / 2.2 | 68 | intergenic (+17/‑59) | PP_0015/PP_0016 | transposon protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (33/31); new base C (2/2); total (35/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01 | |||||||||||
GCCCAGGCTTTTGAAGACGAGGTTTGGAGCTACGCCACCGAGGATCGAAACCCCTTCAGTGCGAGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGAAAGTCTTTTGGGGTACCTGCAGCGCCTGGCGAAAGCCAACGGATTAC > NC_002947/19991‑20285 | gCCCAGGCTTTTGAAGACGAGGTTTGGAGCTACGCCACCGAGGATCGAAACCCCTTCAGTGCGAGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGACCGGGCt > 4:338780/1‑149 (MQ=255) aCGAGGTTTGGAGCTACGCCACCGAGGATCGAAACCCCTTCAGTGCGAGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGTCGAGAGCAGTACCTGA‑‑CGGCCAAGAGCCGGGCCGATAAGCCCGGccctt < 1:80725/149‑2 (MQ=255) gAGGTTTGGAGCTACGCCACCGAGGATCGAAACCCCTTCAGTGCGAGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACt > 2:103636/1‑149 (MQ=255) gTTTGGAGCTACGCCACCGAGGATCGAAACCCCTTCAGTGCGAGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTccc < 3:262491/149‑1 (MQ=255) gTTTGGAGCTACGCCACCGAGGATCGAAACCCCTTCAGTGCGAGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGAGCCGGGCCGATAAGCCCGGcccttg < 8:227363/145‑3 (MQ=255) gTTTGGAGCTACGCCACCGAGGATCGAAACCCCTTCAGTGCGAGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGAGCCGGGCCGATAAGCCCGGcccttg > 7:227363/1‑143 (MQ=255) tttGGAGCTACGCCACCGAGGATCGAAACCCCTTCAGTGCGAGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTcccc < 2:30844/149‑1 (MQ=255) tGGAGCTACGCCAACGAGGATCGAAACCCCATCAGTGCGAGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCt > 1:198596/1‑148 (MQ=255) ggAGCTACGCCACCGAGGATCGAAACCCCTTCAGTGCGAGCTTCAATTTCAAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGa > 8:169722/1‑149 (MQ=255) cTACGCCACCGAGGATCGAAACCCCTTCAGTGCGAGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGAtttt > 5:285171/1‑149 (MQ=255) cGCCACCGAGGATCGAAACCCCTTCAGTGCGAGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTAt < 6:285171/149‑1 (MQ=255) cACCGAGGATCGAAACCCCTTCAGTGCGAGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGATCTACACCCCTGATTTTTATGTc > 8:90560/1‑149 (MQ=255) aGGATCGAAACCCCTTCAGTGCGAGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGa < 7:169722/149‑1 (MQ=255) aTCGAAACCCCTTCAGTGCGAGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGATAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATATTTATGTCTTCGAtt < 7:66405/148‑1 (MQ=255) tCGAAACCCCTTCAGTGCGAGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGAttt > 2:323703/1‑148 (MQ=255) aaaCACATTCAGTGCGAGCTTCAATTTCCAGACACTGTTCGGGAAGCGGGAGACGTTTGAGACGTTCGAAGACAGCAGTACATGA‑‑CGGCAAAGAGCCGGGCTTATCGGAACCGCTCTACTCCCCTGATTTTTATGTCTTCGATTTAAtt > 8:149669/1‑148 (MQ=255) ccccTTCAGTGCGAGCTTCAATTTCCTGCCTCTGTTCTGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGAt < 2:198596/149‑1 (MQ=255) ccccTTCAGTGCGAGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGAt < 2:171842/149‑1 (MQ=255) ccTTCAGTGCGAGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGACCCTGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGAt < 1:103636/149‑1 (MQ=255) cAGTGCGAGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATgtgt < 3:272088/147‑1 (MQ=255) gTGCGAGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAgg > 5:148590/1‑148 (MQ=255) aGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGtt < 6:110700/149‑1 (MQ=255) aGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTACCCTGATTTTTATGTCTTCGATTTAATGGATGTGTAGGAATGtt > 4:203019/1‑149 (MQ=255) cTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGTGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTg < 3:63019/149‑1 (MQ=255) cTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTg < 1:250796/149‑1 (MQ=255) aTTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATgtgt > 7:166126/1‑133 (MQ=255) aTTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATgtgt < 8:166126/133‑1 (MQ=255) cAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTaa > 6:258927/1‑148 (MQ=255) cAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTaa < 3:9525/148‑1 (MQ=255) cAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTaa > 4:9525/1‑148 (MQ=255) cAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAAt < 6:148590/149‑1 (MQ=255) cAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGACCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTaa < 3:338780/148‑1 (MQ=255) aGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCtttt < 2:74151/145‑1 (MQ=255) aGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCtttt > 1:74151/1‑145 (MQ=255) gCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATc > 7:234930/1‑148 (MQ=255) gCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTAGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATc > 4:95868/1‑148 (MQ=255) ccTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGAt < 4:7042/121‑1 (MQ=255) ccTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGAt > 3:7042/1‑121 (MQ=255) ccTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCaa < 1:323703/149‑1 (MQ=255) tGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCa > 3:75080/1‑149 (MQ=255) cGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGa < 5:211779/148‑1 (MQ=255) cGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGa < 8:234930/148‑1 (MQ=255) ggAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTg < 2:238043/126‑1 (MQ=255) ggAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTg > 1:238043/1‑126 (MQ=255) gAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACca > 6:304360/1‑148 (MQ=255) gAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGa < 7:90560/149‑1 (MQ=255) aCGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGAAAGTCtttt < 1:155859/149‑1 (MQ=255) cGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGAAAGTCTTTTg < 3:95868/149‑1 (MQ=255) gTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCCGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGAAAGTCTTTTgg > 7:11756/1‑149 (MQ=255) ttCGAAGATAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGAAAGTCTTTTggg < 3:203019/149‑1 (MQ=255) aaGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGaaa < 1:163539/135‑1 (MQ=255) aaGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGaaa > 2:163539/1‑135 (MQ=255) aaGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGAAAGTCTTTTgggg < 5:157764/146‑1 (MQ=255) aaGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGAAAGTCTTTTgggg > 6:157764/1‑146 (MQ=255) aaGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGAAAGTCTTTTGGGGTAc > 4:161277/1‑149 (MQ=255) aaGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATAAACCCACGACCACACCAAGACGAAAGTCTTTTGGGGTAc > 6:21757/1‑149 (MQ=255) agagagCAGTACCTGA‑‑CGGCCAAGCGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGAAAGTCTTTTGGGGTAcc < 7:149669/149‑1 (MQ=255) tACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGAAAGTCTTTTGGGGTACCTGCAGCGcc > 6:222916/1‑149 (MQ=255) tACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGAAAGTCTTTTGGGGTACCTGCAGCGcc > 5:168484/1‑149 (MQ=255) ccTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAg > 3:152568/1‑117 (MQ=255) ccTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAg < 4:152568/117‑1 (MQ=255) ccTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGAAAGTCTTTTGGGGTACCTGCAGCGCCTg > 2:232311/1‑149 (MQ=255) cTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGAAAGTCTTTTGGGGTACCTGCAGCGCCTgg > 8:56217/1‑149 (MQ=255) tGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGAAAGTCTTTTGGGGTACCTGCAGCGCCTGGc > 6:134841/1‑149 (MQ=255) ggCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGAAAGTCTTTTGGGGTACCTGCAGCGCCTGGCGaaa < 3:161277/149‑1 (MQ=255) agtagagCCGGGCCGATAAGCCCGGCCCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGAAAGTCTTTTGGGGTACCTGCAGCGCCTGGCGAAAGc > 5:152509/7‑149 (MQ=255) cAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGAAAGTCTTTTGGGGTACCTGCAGCGCCTGGCGAAAGc > 1:152803/1‑148 (MQ=255) ccGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATTGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGAAAGTCTTTTGGGGTACCTGCAGCGCCTGGCGAAAGCCAACGGa > 2:286708/1‑149 (MQ=255) gCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGAAAGTCTTTTGGGGTACCTGCAGCGCCTGGCGAAAGCCAACGGATTAc > 5:126807/1‑149 (MQ=255) | GCCCAGGCTTTTGAAGACGAGGTTTGGAGCTACGCCACCGAGGATCGAAACCCCTTCAGTGCGAGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA‑‑CGGCCAAGGGCCGGGCTTATCGGCCCGGCTCTACTCCCCTGATTTTTATGTCTTCGATTTCATGGATGTGTAGGAATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGAAAGTCTTTTGGGGTACCTGCAGCGCCTGGCGAAAGCCAACGGATTAC > NC_002947/19991‑20285 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |