| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 740,791 | T→C | 7.4% | intergenic (‑165/‑52) | pilC ← / → pilA | type IV fimbrial assembly protein PilC/fimbrial protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 740,791 | 0 | T | C | 7.4% | 186.8 / 5.0 | 67 | intergenic (‑165/‑52) | pilC/pilA | type IV fimbrial assembly protein PilC/fimbrial protein |
| Reads supporting (aligned to +/- strand): ref base T (30/32); new base C (2/3); total (32/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.51e-01 | |||||||||||
CCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGCGACCATCGCCTTACCGATGTACACCAAC > NC_002947/740646‑740938 | cccGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTgg < 6:164443/149‑1 (MQ=255) ggCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGgc < 8:68897/149‑1 (MQ=255) aCAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCaa < 5:30861/149‑1 (MQ=255) aGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCCCAACCGGCAGCGGCGCagtag < 4:42601/149‑5 (MQ=255) cTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATTCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGAcc > 2:5722/1‑149 (MQ=255) taaaCAGCTTGCGGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTGAGCGAAGATGTCTCCAGTGCGGGCTGGGGTGACAATAGGTGTCTGTTAAGGCCTACTGCGGCGGTGCCGGTTGGGGCGCAACTGACCt < 2:268367/146‑1 (MQ=255) gAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTc > 5:213777/1‑148 (MQ=255) aGCTTACCGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAAt < 1:286226/146‑1 (MQ=255) aGCTTACCGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAAt > 2:286226/1‑146 (MQ=255) gcgTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGaa < 1:166454/149‑1 (MQ=255) gTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAAt > 2:327824/1‑148 (MQ=255) gCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAg > 8:22901/1‑149 (MQ=255) gCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAg > 8:55306/1‑149 (MQ=255) gCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTa < 2:148506/149‑1 (MQ=255) aCGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACg > 7:294865/1‑149 (MQ=255) gcgTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGc > 6:19091/1‑128 (MQ=255) gcgTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGc < 5:19091/128‑1 (MQ=255) gcgTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGtt < 8:267651/149‑1 (MQ=255) gcgTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCCCAACCGGCAGCGGCGCagtag > 6:79762/1‑108 (MQ=38) gcgTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCCCAACCGGCAGCGGCGCagtag < 5:79762/112‑5 (MQ=38) gTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCa > 5:157839/1‑149 (MQ=255) tCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCAt < 7:22901/149‑1 (MQ=255) gTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCACAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCAtca > 7:94285/1‑146 (MQ=255) aTGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAgg > 2:232019/1‑149 (MQ=255) gCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAggg > 1:140120/1‑148 (MQ=255) gCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAggg > 3:132772/1‑148 (MQ=255) gCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCCCAACCGGCAGCGGCGCagtag < 6:237747/101‑5 (MQ=37) gCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCCCAACCGGCAGCGGCGCagtag > 5:237747/1‑97 (MQ=37) tAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGtt < 5:101365/83‑1 (MQ=255) tAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGtt > 6:101365/1‑83 (MQ=255) gagTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCgg < 7:55306/148‑1 (MQ=255) tagtTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATc < 1:5722/149‑1 (MQ=255) gtTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGGAAACTACGTTCATGAAAGGGCAACGCgg < 1:14662/144‑1 (MQ=255) gtTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCgg > 2:14662/1‑143 (MQ=255) tCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCAcc < 8:294865/148‑1 (MQ=255) aGCGAAGATGACGCCCGTGCGGGCATGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCt > 6:321729/1‑148 (MQ=255) aGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCt > 6:311967/1‑148 (MQ=255) gAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGAt < 5:311967/148‑1 (MQ=255) gAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATc > 3:95308/1‑149 (MQ=255) cccctgCCCGCACGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTa < 7:297838/129‑1 (MQ=255) cccctgCCCGCACGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTa > 8:297838/6‑134 (MQ=255) aCGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACtga > 5:180858/1‑149 (MQ=255) aCGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACtga < 2:140120/149‑1 (MQ=255) aCGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACtga < 1:232019/149‑1 (MQ=255) cGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGAtc < 6:213777/149‑1 (MQ=255) gCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGAtcgtcgtcg < 1:327824/149‑1 (MQ=255) gTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGatca > 6:215661/1‑149 (MQ=255) cAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGACCTGATGAACGTCGTCGCGatcatccg > 8:124548/1‑147 (MQ=255) aaaaGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCgg > 2:345138/1‑148 (MQ=255) gtgtCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCt < 8:221315/149‑1 (MQ=255) ttCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGCGa < 6:157839/147‑1 (MQ=255) aGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGCGACCATc < 4:132772/149‑1 (MQ=255) aGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGCGACCATc > 3:253031/1‑149 (MQ=255) ggCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGCGACCATCg < 4:253031/149‑1 (MQ=255) ggCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGCGACCATCg > 7:167303/1‑149 (MQ=255) cTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGAGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGCGACCATCGCCt > 4:298063/1‑149 (MQ=255) aCTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGCGACCATCGCCTTa > 2:70259/1‑149 (MQ=255) cTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGCGACCATCGCCTTa < 6:180858/148‑1 (MQ=255) cTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGCGACCATCGCCTTAc < 5:215661/149‑1 (MQ=255) tGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGCGACCATCGCCTTAcc > 6:115032/1‑149 (MQ=255) cgccgcTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑ACCTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGCGACCATCGCCTTACCGa > 7:78179/1‑149 (MQ=255) cgccgcTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGTCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGCGACCATCGCCTTACCg < 5:321729/148‑1 (MQ=255) gccgcTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGCGACCATCGCCTTACCGAt < 1:70259/149‑1 (MQ=255) ccgcTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGCGACCATCGCCTTACCGATg < 8:167303/149‑1 (MQ=255) cgcTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGc < 7:247521/129‑1 (MQ=255) cgcTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGc > 8:247521/1‑129 (MQ=255) cgcTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGCGACCATCGCCTTACCGATg > 1:132489/1‑148 (MQ=255) ccGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGCGACCATCGCCTTACCGATGTacac < 4:95308/148‑1 (MQ=255) gTTGGGGCGCAACTGACCTCAATGAGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGCGACCATCGCCTTACCGATGTACaccaac < 3:298063/149‑1 (MQ=255) | CCCGGCGACAAGCCTGGAAACAGCTTGCCGCGTCCATGCAAGGGCACGCGTCCGTGATGCTCACTAGAGTAGTTCAGCGAAGATGACGCCCGTGCGGGCAGGGGTGACAAAAGGTGTCTGTTCAGGCCTACTGCGCCGCTGCCGGTTGGGGCGCAACTGACCTCAATGTGTAAGCGAATCAAAAAGG‑AACTACGTTCATGAAAGGGCAACGCGGTATCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGCGACCATCGCCTTACCGATGTACACCAAC > NC_002947/740646‑740938 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |