Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 936,224 G→C 6.1% P3133R (CCG→CGG)  PP_0806 ← surface adhesion protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947936,2240GC 6.1% 208.0 / 4.2 65P3133R (CCG→CGG) PP_0806surface adhesion protein
Reads supporting (aligned to +/- strand):  ref base G (30/31);  new base C (2/2);  total (32/33)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.44e-01

GTGAGCAGGCTGCCATCGGCACTCAGTTGCAGTTCGCTGGCTTCATTGGGCGGGGTGATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCGGAAACGCTGGAGCCGTCACCGGCCACCACCACGCCGCTCG  >  NC_002947/936077‑936371
                                                                                                                                                   |                                                                                                                                                   
gTGAGCAGGCTGCCATCGGCACTCAGTTGCAGTTCGCTGGCTTCATTGGGCGGGGTGATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCgg                                                                                                                                                    >  3:282039/1‑149 (MQ=255)
 tGAGCATGCTGCCATCGGCACTCAGTTTCAGTTCGCTGGCTTCTTTGGGCGGGGTGATATCGGGGGGGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTTGCCTGGGCCggg                                                                                                                                                   <  8:83870/149‑1 (MQ=255)
 tGAGCAGGCTGCCATCGGCACTCAGTTGCAGTTCGCTGGCTTCATTGGGCGGGGTGATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCggg                                                                                                                                                   <  6:213418/149‑1 (MQ=255)
        gCTGCCATCGGCACTCAGTTGCAGTTCGCTGGCTTCATTGGGCGGGGTGATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGc                                                                                                                                            >  8:247205/1‑149 (MQ=255)
             cATCGGCACTCAGTTGCAGTTCGCTGGCTTCATTGGGCGGGGTGATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACg                                                                                                                                       >  1:106866/1‑149 (MQ=255)
             cATCGGCACTCAGTTGCAGTTCGCTGGCTTCATTGGGCGGGGTGATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACg                                                                                                                                       >  4:265271/1‑149 (MQ=255)
             cATCGGCACTCAGTTGCAGTTCGCTGGCTTCATTGGGCGGGGTGATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTCGGCCTGACCCCGGCCCAGGCCAACg                                                                                                                                       <  8:63575/149‑1 (MQ=255)
                         gTTGCAGTTCGCTGGCTTCATTGGGCGGGGTGATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCggg                                                                                                                                                   >  5:277998/1‑125 (MQ=255)
                         gTTGCAGTTCGCTGGCTTCATTGGGCGGGGTGATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCggg                                                                                                                                                   <  6:277998/125‑1 (MQ=255)
                          ttGCAGTTCGCTGGCTTCATTGGGCGGGGTGATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCAt                                                                                                                          >  3:52472/1‑149 (MQ=255)
                             cAGTTCGCTGGCTTCATTGGGCGGGGTTATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCg                                                                                                                       <  8:55964/149‑1 (MQ=255)
                             cAGTTCGCTGGCTTCATTGGGCGGGGTGATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCg                                                                                                                       <  8:60602/149‑1 (MQ=255)
                             cAGTTCGCTGGCTTCATTGGGCGGGGTGATATAGGGGGCGGTCATCTCCGTAGGCAGCCAACTGTTGCCAGCGCCGTCAACCGCCACCACATCCAGGGGCTCGACGTTGGCCTGGGCCGGGGACAGGCCGACGGTGAAGCTGCCATCCg                                                                                                                       >  1:325988/1‑149 (MQ=255)
                               gTTCGCTGGCTTCATTGGGCGGGGTGATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGa                                                                                                                     <  7:1371/149‑1 (MQ=255)
                                     tGGCTTCATTGGGCGGGGTGATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCggg                                                                                                                                                   <  2:242728/113‑1 (MQ=255)
                                     tGGCTTCATTGGGCGGGGTGATATCGGGGGCGGTGATCTGGGTAGCCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCggg                                                                                                                                                   >  1:242728/1‑113 (MQ=255)
                                       gCTTCATTGGGCGGGGTGATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTg                                                                                                             >  3:290415/1‑149 (MQ=255)
                                        cTTCATTGGGCGGGGTGATATGGTGGGCGGTGATCTGGTTTGGCAACGAACTGTTGCCAGCGCCGTCAACCGCAACGACATCCAGGGTCTCGCGGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTgg                                                                                                            <  7:139958/149‑1 (MQ=255)
                                         ttCATTGGGCGGGGTGATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTggg                                                                                                           >  5:22827/1‑149 (MQ=255)
                                           cATTGGGCGGGGTGATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGgc                                                                                                          <  4:52472/148‑1 (MQ=255)
                                                  cGGGGTGATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACg                                                                                                                                       >  6:254058/1‑112 (MQ=255)
                                                  cGGGGTGATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCa                                                                                                  <  2:106866/149‑1 (MQ=255)
                                                  cGGGGTGATAACGGGGGCGGTGATCTGGGTAGGCAGCTAACTGTTGCCAGCGCATTCAACCTCAACGACATCCAGGTTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCa                                                                                                  <  2:192969/149‑1 (MQ=255)
                                                   ggggTGATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAg                                                                                                 >  5:35332/1‑149 (MQ=255)
                                                     ggTGATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCAGCGCCCAggc                                                                                               <  4:129446/149‑2 (MQ=255)
                                                           atCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGa                                                                                                                     >  6:351403/1‑121 (MQ=255)
                                                           atCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGa                                                                                                                     <  5:351403/121‑1 (MQ=255)
                                                                  gCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCACTGCCCAGGACATTGCCCTgcgc                                                                                  >  7:257144/1‑149 (MQ=255)
                                                                    ggTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGt                                                                                <  3:265271/149‑1 (MQ=255)
                                                                    ggTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGt                                                                                >  5:95877/1‑149 (MQ=255)
                                                                       gATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGATGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCAc                                                                             >  5:41888/1‑149 (MQ=255)
                                                                             ggTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCACTGCCCAGGACATTGCCCTGCGCGTCACGCACt                                                                        <  8:257144/148‑1 (MQ=255)
                                                                                     gCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCa                                                                                                  >  1:23214/1‑114 (MQ=255)
                                                                                     gCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCa                                                                                                  <  2:23214/114‑1 (MQ=255)
                                                                                      cGAACTTTTGCCTGCTGGTTCAACCGCCCCGACATCCAGGGGGTCGCCGTTGGCCTGGGCCGGGGTCAGTCCGAGGGTGATGCTGCCATCCGGACCGGCCTGGGGTCTGCCCAGGACATTGCCCTGAGCGTGACGCACTTCCACCTgg                                                               <  2:325988/148‑1 (MQ=255)
                                                                                      cGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTggg                                                              <  4:282039/149‑1 (MQ=255)
                                                                                      cGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTggg                                                              >  4:165501/1‑149 (MQ=255)
                                                                                       ctgcTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCGCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGt                                                             <  6:339394/146‑1 (MQ=255)
                                                                                           tGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCt                                                         >  8:54615/1‑149 (MQ=255)
                                                                                               gCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCg                                                     >  4:155108/1‑149 (MQ=255)
                                                                                               gCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCg                                                     >  6:232460/1‑149 (MQ=255)
                                                                                                   gcgcCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCAc                                                                   >  3:184076/1‑131 (MQ=255)
                                                                                                   gcgcCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCAc                                                                   <  4:184076/131‑1 (MQ=255)
                                                                                                   gcgcCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGATGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGc                                                 <  6:41888/149‑1 (MQ=255)
                                                                                                      ccGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTgc                                                                                    <  3:302910/111‑1 (MQ=255)
                                                                                                      ccGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTgc                                                                                    >  4:302910/1‑111 (MQ=255)
                                                                                                       cGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTa                                             <  6:22827/149‑1 (MQ=255)
                                                                                                         tCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTAcc                                           <  5:232460/149‑1 (MQ=255)
                                                                                                         tCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTAcc                                           <  7:54615/149‑1 (MQ=255)
                                                                                                           aaCCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCg                                          >  2:332571/1‑148 (MQ=255)
                                                                                                            aCCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGCTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCgg                                         >  5:228160/1‑148 (MQ=255)
                                                                                                                 cACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCGGAAAc                                     >  4:111438/1‑147 (MQ=255)
                                                                                                                 cACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCGGAAAc                                     <  3:111438/147‑1 (MQ=255)
                                                                                                                   cGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCGGAAACGCTg                                 <  6:35332/149‑1 (MQ=255)
                                                                                                                       aTCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCGGAAACGCTGGAGc                             >  8:120326/1‑149 (MQ=255)
                                                                                                                         ccAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCGGAAACGCTGGAGcc                            >  7:258070/1‑148 (MQ=255)
                                                                                                                         ccAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCGGAAACGCTGGAGcc                            <  8:258070/148‑1 (MQ=255)
                                                                                                                          cAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCGGAAACGCTGGAGCCg                           <  6:95877/148‑1 (MQ=255)
                                                                                                                           aGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCGGAAACGCTGGAGCCGt                          >  1:83228/1‑148 (MQ=255)
                                                                                                                           aGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCGGAAACGCTGGAGCCGTc                         >  7:47057/1‑149 (MQ=255)
                                                                                                                             ggTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCGGAAACGCTGGAGCCGTc                         <  1:332571/147‑1 (MQ=255)
                                                                                                                                ctcGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCGGAAACGCTGGAGCCGTCACCgg                    >  6:289127/1‑149 (MQ=255)
                                                                                                                                 tcaccGTCGGCCTGACCCCGGCCCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGt                                              >  5:304053/4‑122 (MQ=38)
                                                                                                                                 tcaccGTCGGCCTGACCCCGGCCCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGt                                              <  6:304053/119‑1 (MQ=38)
                                                                                                                                   gCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGc                                                                                                                <  6:70293/54‑1 (MQ=255)
                                                                                                                                     cGTCGGCCTGACCCCGGCCCAGGCCAACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCGGAAACGCTGGAGCCGTCACCGGccacc               >  3:194545/1‑149 (MQ=255)
                                                                                                                                          gCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCGGAAACGCTGGAGCCGTCACCGGccaccacca           <  8:47057/148‑1 (MQ=255)
                                                                                                                                          gCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCGGAAACGCTGGAGCCGTCACCGGccaccacca           <  2:83228/148‑1 (MQ=255)
                                                                                                                                            cTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCGGAAACGCTGGAGCCGTCACCGGCCACCACCAcgc        >  1:310336/1‑149 (MQ=255)
                                                                                                                                                 ccGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCGGAAACGCTGGAGCCGTCACCg                     >  8:184888/1‑131 (MQ=255)
                                                                                                                                                 ccGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCGGAAACGCTGGAGCCGTCACCg                     <  7:184888/131‑1 (MQ=255)
                                                                                                                                                  cGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCGGAAACGCTGGAGCCGTCACCGGCCACCACCACGCCGCTCg  <  3:165501/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
GTGAGCAGGCTGCCATCGGCACTCAGTTGCAGTTCGCTGGCTTCATTGGGCGGGGTGATATCGGGGGCGGTGATCTGGGTAGGCAGCGAACTGTTGCCAGCGCCGTCAACCGCCACGACATCCAGGGTCTCGCCGTTGGCCTGGGCCGGGGTCAGGCCGACGGTGAAGCTGCCATCCGGACCGGCCTGGGCGCTGCCCAGGACATTGCCCTGCGCGTCACGCACTTCCACCTGGGTATCTGCCGGTGCGGTACCGGAAACGCTGGAGCCGTCACCGGCCACCACCACGCCGCTCG  >  NC_002947/936077‑936371

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑