| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 127,123 | G→C | 8.2% | intergenic (‑33/+37) | thrB ← / ← PP_0122 | homoserine kinase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 127,123 | 0 | G | C | 8.2% | 215.7 / 9.2 | 73 | intergenic (‑33/+37) | thrB/PP_0122 | homoserine kinase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (32/35); new base C (2/4); total (34/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.27e-01 | |||||||||||
AATTGCTGTTCTCGGTACCGGCGGCAATGCCCTGGAAGTCGAGCAGACGGCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAATTGGCATCAGTGCCATCAGCGCGTACCAGAAAATAAGGCTTGCCGTTTTTC > NC_002947/126976‑127271 | aaTTGCTGTTCTCGGTACCGGCGGCAATGCCATGGAAGTCGAGCAGACGGCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCgg > 1:205476/1‑149 (MQ=255) ttGCTGTTCTCGGTACCGGCGGCAATGCCCTGGAAGTCGAGCAGACGGCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGa < 4:277903/149‑1 (MQ=255) ttCTCGGTACCGGCGGCAATGCCCTGGAAGTCGAGCAGACGGCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGcc > 1:150534/1‑149 (MQ=255) ttCTCGGTACCGGCGGCAATGCCCTGGAAGTCGAGCAGACGGCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGcc < 2:205476/149‑1 (MQ=255) ttCTCGGTACCGGCGGCAATGCCCTGGAAGTCGAGCAGACGGCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCCGGCGGAAGTGc < 2:166729/148‑1 (MQ=255) ctcGGTACCGGCGGCAATGCCCTGGAAGTCGAGCAGACGGCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCCGGCGGAAGTGccc < 7:193260/148‑2 (MQ=255) ccGGCGGCAATGCCCTGGAAGTCGAGCAGACGGCCCATCTCGTACGGCGCCATAAAGGTTTCCAGCTCAGTCCGTGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGACGGGAAGTGCCGGGTTGAt < 1:47547/148‑1 (MQ=255) ccGGCGGCAATGCCCTGGAAGTCGAGCAGACGGCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGAt < 2:150534/148‑1 (MQ=255) cggcggCAATGCCCTGGAAGTCGAGCAGACGGCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGAtgt > 8:314016/1‑149 (MQ=255) cggcggCAATGCCCTGGAAGTCGAGCAGACGGCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGAtgt < 6:225824/149‑1 (MQ=255) cggcAATGCCCTGGAAGTCGAGCAGACGGCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGtt < 8:314943/141‑1 (MQ=255) cggcAATGCCCTGGAAGTCGAGCAGACGGCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGtt > 7:314943/1‑141 (MQ=255) tGCCCTGGAAGTCGAGCAGACGGCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTgc < 6:50037/149‑1 (MQ=255) tGCCCTGGAAGTCGAGCAGACGGCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTgc < 4:249217/149‑1 (MQ=255) tGGAAGTCGAGCAGACGGCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGt > 1:340754/1‑148 (MQ=255) ggAAGTCGAGCAGACGGCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGt > 5:134146/1‑147 (MQ=255) gAAGTCGAGCAGACGGCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTc < 4:70408/147‑1 (MQ=255) cAGACGGCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACCGGCACTTCCCGGCGGAAGTGcccgtatg > 6:306225/1‑114 (MQ=38) cAGACGGCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACCGGCACTTCCCGGCGGAAGTGcccgtatg < 5:306225/120‑7 (MQ=38) gACGGCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTc > 3:148041/1‑148 (MQ=255) ggCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCg > 8:248484/1‑146 (MQ=255) gCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCg > 6:41059/1‑145 (MQ=255) gCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCg > 8:24286/1‑145 (MQ=255) cccAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTAc < 5:64838/138‑1 (MQ=255) cccAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTAc > 6:64838/1‑138 (MQ=255) cccAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCg > 8:5275/1‑144 (MQ=255) ccAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATc > 1:212908/1‑149 (MQ=255) aGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCtt < 6:134146/149‑1 (MQ=255) gCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTc < 4:148041/149‑1 (MQ=255) cGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCgg < 1:170312/92‑1 (MQ=255) cGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCgg > 2:170312/1‑92 (MQ=255) gTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCa < 7:248484/147‑1 (MQ=255) gTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAgg < 2:208426/149‑1 (MQ=255) gTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAg > 7:323522/1‑148 (MQ=255) tACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTAc < 6:128144/129‑1 (MQ=255) tACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTAc > 5:128144/1‑129 (MQ=255) tACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGa < 1:27648/149‑1 (MQ=255) ggCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACg > 2:10793/1‑148 (MQ=255) gcCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAAt < 3:234720/149‑1 (MQ=255) aGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAg > 3:216887/1‑149 (MQ=255) gAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGc < 2:290304/149‑1 (MQ=255) aaaGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCa > 7:125701/1‑149 (MQ=255) tttCCATCTCATGCCGGGTCAGGGGGGTGAAGACTGACATTATGAAAAATTGCCCATACGGGCACTTGCTCCGTTAAGTTCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTGCAGGACGGa < 8:266967/137‑1 (MQ=255) tttCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTcc > 4:48699/1‑149 (MQ=255) tttCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTcc < 7:5275/149‑1 (MQ=255) tttCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAACTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACgca > 7:266967/1‑135 (MQ=255) ccAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCgg < 7:24286/148‑1 (MQ=255) aGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTg < 2:212908/149‑1 (MQ=255) cTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGt < 8:280968/149‑1 (MQ=255) cTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGt < 5:41059/149‑1 (MQ=255) cTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGt > 2:60944/1‑149 (MQ=255) aGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTc < 1:60944/147‑1 (MQ=255) aGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCgg < 8:125701/149‑1 (MQ=255) gCCGTGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGAt < 8:323522/149‑1 (MQ=255) gCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGAt > 4:96671/1‑149 (MQ=255) gggTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCg > 3:212721/1‑148 (MQ=255) gTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAAt < 6:175305/149‑1 (MQ=255) accccaggTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATg < 1:294703/142‑1 (MQ=255) gggggTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAAt > 2:272221/1‑149 (MQ=255) gggggTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAAt > 6:143678/1‑149 (MQ=255) aCATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAATTGGCATCAGTGCCa > 1:331585/1‑149 (MQ=255) aCATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAATTGGCATCAGTGCCa > 7:68225/1‑149 (MQ=255) tgatgaAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGc > 2:259462/1‑104 (MQ=255) atgaAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAATTGGCATCAGTGCCATCAgc < 2:55300/149‑1 (MQ=255) atgaAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAATTGGCATCAGTGCCATCAgc > 5:283662/1‑149 (MQ=255) tgaAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAATTGGCATCAGTGCCATCAgcg > 1:173946/1‑149 (MQ=255) gaAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAAt > 2:235054/1‑123 (MQ=255) gaAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAAt < 1:235054/123‑1 (MQ=255) aaaaTTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAATTGGCATCAGTGCCATCAGcgcg > 3:185426/1‑148 (MQ=255) cccATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAATTGGCATCAGTGCCATCAGCGCGTACCAGa < 7:89750/148‑1 (MQ=255) cccATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAATTGGCATCAGTGCCATCAGCGCGTACCAGa > 4:95085/1‑148 (MQ=255) aTACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAATTGGCATCAGTGCCATCAGCGCGTACCAGAAAAt < 2:340754/149‑1 (MQ=255) cGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGACCGGCTGGTCGGATCGAATGAAATTGGCATCAGTGCCATCAGCGCGTACCAGAAAATaa < 1:272221/148‑1 (MQ=255) gggCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAATTGGCATCAGTGCCATCAGCGCGTACCAGAAAATAAgg < 6:283662/149‑1 (MQ=255) ggCACTTCCCGGCGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAATTGGCATCAGTGcc > 1:215912/1‑124 (MQ=255) ggCACTTCCCGGCGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAATTGGCATCAGTGcc < 2:215912/124‑1 (MQ=255) cgccgGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAATTGGCATCAGTGCCATCAGCGCGTACCAGAAAATAAGGCTTGCCGtt > 5:66683/1‑149 (MQ=255) gccgGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAATTGGCATCAGTGCCATCAGCGCGTACCAGAAAATAAGGCTTGCCGttt > 6:175322/1‑149 (MQ=255) gggAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAATTGGCATCAGTGCCATCAGCGCGTACCAGAAAATAAGGCTTGCCGTTTTTc < 4:216887/149‑1 (MQ=255) | AATTGCTGTTCTCGGTACCGGCGGCAATGCCCTGGAAGTCGAGCAGACGGCCCAGCTCGTACGGCGCCAGAAAGGTTTCCAGCTCAGGCCGGGTCACGGGGGTGAAGACTGACATGATGAAAAATTGCCCATACGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAATTGGCATCAGTGCCATCAGCGCGTACCAGAAAATAAGGCTTGCCGTTTTTC > NC_002947/126976‑127271 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |