Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,205,646 T→C 8.5% E39G (GAG→GGG)  PP_1057 ← PadR family transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,205,6460TC 8.5% 161.0 / 5.5 59E39G (GAG→GGG) PP_1057PadR family transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base T (27/27);  new base C (3/2);  total (30/29)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.85e-01

GTTTGCTGCCTTGTACCTGGCCGCTGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCG  >  NC_002947/1205500‑1205793
                                                                                                                                                   |                                                                                                                                                    
gTTTGCTGCCTTGTACCTGGCCGCTGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGATGTAGCTGCCGTCGAAAAGATTTTCGATCTGGCGGATAAGTTCTTAACCTTGGCCGGGATGCTCg                                                                                                                                                    >  2:258602/1‑149 (MQ=255)
    gctgcCTTGTACCTGGCCGCTGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGc                                                                                                                                                  >  8:87037/1‑147 (MQ=255)
          ttGTACCTGGCCGCTGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGt                                                                                                                                          >  7:308378/1‑149 (MQ=255)
            gTACCTGGCCGCTGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTc                                                                                                                                         <  3:250861/148‑1 (MQ=255)
                   gCCGCTGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGTCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATc                                                                                                                                  <  4:65707/148‑1 (MQ=255)
                        tGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGTCGGGCTGCTCGGCCAGCAAGTCCAGCATCagcagc                                                                                                                           >  3:57710/1‑149 (MQ=255)
                        tGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCagcagc                                                                                                                           >  3:175187/1‑149 (MQ=255)
                              gTTCGGCCTCTTCAATGAATTTCAGCGTGGGGGATATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCTGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAg                                                                                                                      <  1:258602/149‑1 (MQ=255)
                                          cAAGGAAGTTCAGCGTGTGATAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACATATTTTCCATCTCGCGGATCAGGTCGTAACAGTGGCCGGTCTGCTCGGCCAGCAAGTCAAGCATCAGCAGCTTGAGCTCACCCgggcc                                                                                                          >  4:176555/1‑146 (MQ=255)
                                          cAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTc                                                                                                                                         >  6:116537/1‑118 (MQ=255)
                                          cAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTc                                                                                                                                         <  5:116537/118‑1 (MQ=255)
                                          cAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATc                                                                                                                                  >  4:291078/1‑125 (MQ=255)
                                          cAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATc                                                                                                                                  <  3:291078/125‑1 (MQ=255)
                                            aGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGTCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGaa                                                                                                       <  4:57710/149‑1 (MQ=255)
                                             ggAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCg                                                                                                         >  2:165140/1‑146 (MQ=255)
                                                   tCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGCAGACAcgc                                                                                                >  1:186818/1‑149 (MQ=255)
                                                           gggTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCcgcg                                                                                        <  3:164827/149‑1 (MQ=255)
                                                                 aTCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGa                                                                                                        >  7:134719/1‑127 (MQ=255)
                                                                 aTCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGa                                                                                                        <  8:134719/127‑1 (MQ=255)
                                                                        cAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCACGCTTGAGGTCACCCGGGGCGAAGACACGCgg                                                                                              <  1:36189/131‑1 (MQ=255)
                                                                        cAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCgg                                                                                              >  2:36189/1‑130 (MQ=255)
                                                                         aGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCAcgggcgg                                                                          >  5:309820/1‑149 (MQ=255)
                                                                           ggCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACgggcgggg                                                                        >  8:247249/1‑149 (MQ=255)
                                                                            gCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACgggcggggc                                                                       <  4:175187/149‑1 (MQ=255)
                                                                            gCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCACTCGCCACgggcggggc                                                                       >  1:234183/1‑149 (MQ=255)
                                                                              ttGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGgcgc                                                                     >  1:89443/1‑149 (MQ=255)
                                                                                  gCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCt                                                                 >  8:175144/1‑149 (MQ=255)
                                                                                   cTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTc                                                                >  5:22218/1‑149 (MQ=255)
                                                                                    tGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTc                                                                >  2:235413/1‑148 (MQ=255)
                                                                                        gCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAg                                                            <  1:235413/148‑1 (MQ=255)
                                                                                        gCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAg                                                            <  8:308378/148‑1 (MQ=255)
                                                                                                   aCAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAggg                                                >  6:193620/1‑149 (MQ=255)
                                                                                                   aCAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAgg                                                 <  4:21607/148‑1 (MQ=255)
                                                                                                   aCAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTCAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCACGCCACGGGCGGGGCGCCGCTCCAAGGGAGCATGAggg                                                >  4:224234/1‑149 (MQ=255)
                                                                                                     aGATTTTCGATCTGGCGGATCACGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACCCGGGCCGCGCTCGCCACGGGCGGGGCCCCGCTCGAAGGGATCATGAgggg                                               >  5:24777/1‑148 (MQ=255)
                                                                                                         tttCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGt                                          >  7:58639/1‑149 (MQ=255)
                                                                                                                  ggCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCa                                   >  3:139376/1‑147 (MQ=255)
                                                                                                                   gCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCcgcg                                                                                        >  3:35171/1‑93 (MQ=255)
                                                                                                                   gCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCcgcg                                                                                        <  4:35171/93‑1 (MQ=255)
                                                                                                                   gCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCACTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTcgcg                                     <  2:234183/144‑1 (MQ=255)
                                                                                                                    cGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCatagg                               <  7:175144/149‑1 (MQ=255)
                                                                                                                        tCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCatagggata                           <  7:247249/149‑1 (MQ=255)
                                                                                                                          aGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCCCgcccgtggcgagc                                                                   <  2:14276/107‑4 (MQ=255)
                                                                                                                          aGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCatagggatag                          <  1:165140/148‑1 (MQ=255)
                                                                                                                           ggTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCatagggataggg                        <  3:176555/149‑1 (MQ=255)
                                                                                                                                     gctGGCCGAGCAGCCCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAgggg                                               >  1:57526/3‑117 (MQ=255)
                                                                                                                                     gctGGCCGAGCAGCCCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAgggg                                               <  2:57526/115‑1 (MQ=255)
                                                                                                                                     cGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCcgtcgt               >  4:307268/1‑149 (MQ=255)
                                                                                                                                      gTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAgg                                                                                                                     <  2:169279/46‑1 (MQ=255)
                                                                                                                                       tGGCCGAGCAGCCCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGaa                                                             <  8:49808/101‑1 (MQ=255)
                                                                                                                                       tGGCCGAGCAGCCCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGaa                                                             >  7:49808/1‑101 (MQ=255)
                                                                                                                                       tGGCCGAGCAGCCCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGttt             >  6:58476/1‑149 (MQ=255)
                                                                                                                                         gCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGGCACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTg            <  6:304186/148‑1 (MQ=255)
                                                                                                                                         gCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGc           <  5:193620/149‑1 (MQ=255)
                                                                                                                                         gCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGc           >  4:83036/1‑149 (MQ=255)
                                                                                                                                          ccGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGGCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCg          <  6:22218/149‑1 (MQ=255)
                                                                                                                                           cGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGa         <  4:139376/149‑1 (MQ=255)
                                                                                                                                           cGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGa         <  8:58639/149‑1 (MQ=255)
                                                                                                                                            gggCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGat        <  2:89443/149‑1 (MQ=255)
                                                                                                                                                 gctCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGGGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGa         <  5:219953/143‑1 (MQ=255)
                                                                                                                                                 gctCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGa         >  6:219953/1‑143 (MQ=255)
                                                                                                                                                   tCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCg  >  7:54933/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GTTTGCTGCCTTGTACCTGGCCGCTGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCG  >  NC_002947/1205500‑1205793

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: