| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,245,895 | C→A | 6.8% | L84M (CTG→ATG) ‡ | PP_1087 → | OmpA family outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,245,895 | 0 | C | A | 6.8% | 229.0 / 4.2 | 71 | L84M (CTG→ATG) ‡ | PP_1087 | OmpA family outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (36/30); new base A (2/3); total (38/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.15e-01 | |||||||||||
AGGGTGACCAGTTCGAGTGTCGTCTGAGCCAGCCGATCGAAGGTTTCGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCAACGGCTTGCTCGACGGGCGTAGCACCGT > NC_002947/1245758‑1246043 | aGGGTGACCAGTTCGAGTGTCGTCTGAGCCAGCCGATCGAAGGTTTCGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCAGgctggcggtg < 2:339079/149‑5 (MQ=255) gggTGACCAGTTCGAGTGTCGTCTGAGCCAGCCGATCGAAGGTTTCGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCgg > 8:301166/1‑149 (MQ=255) cAGTTCGAGTTTCGTCTGAGCCAGCCGATCGAAGGTTTCGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGcc < 2:304893/149‑1 (MQ=255) cAGTTCGAGTGTCGTCTGAGCCAGCCGATCGAAGGTTTCGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGcc > 3:293852/1‑149 (MQ=255) cAGTTCGAGTGTCGTCTGAGCCAGCCGATCGAAGGTTTCGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGcc > 8:42294/1‑149 (MQ=255) gTTCGAGTGTCGTCTGAGCCAGCCGATCGAAGGTTTCGGCAGCGG‑ACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACAGCCAGCAGgctggcggtgc > 8:269765/1‑134 (MQ=255) gTTCGAGTGTCGTCTGAGCCAGCCGATCGAAGGTTTCGGCAGCGG‑ACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACAGCCAGCAGgctggcggtgc < 7:269765/139‑6 (MQ=255) ttCGAGTGTCGTCTGAGCCAGCCGATCGAAGGTTTCGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTg > 4:220620/1‑149 (MQ=255) ttCGAGTGTCGTCTGAGCCAGCCGATCGAAGGTTTCGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCAGgctggcggtgcc < 6:219385/140‑7 (MQ=255) ttCGAGTGTCGTCTGAGCCAGCCGATCGAAGGTTTCGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCAGgctggcggtgcc > 5:219385/1‑134 (MQ=255) gtcTGAGCCAGCCGATCGAAGGTTTCGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTgg < 7:42294/148‑1 (MQ=255) tcTGAGCCAGCCGATCGAAGGTTTCGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGc > 4:115792/1‑149 (MQ=255) tcTGAGCCAGCCGATCGAAGGTTTCGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGc > 5:248556/1‑149 (MQ=255) cTGAGCCAGCCGATCGAAGGTTTCGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCg > 6:85917/1‑149 (MQ=255) agccagccGATCGAAGGTTTCGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTgg < 6:248556/149‑1 (MQ=255) ccagccGATCGAAGGTTTCGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGc > 6:33154/1‑148 (MQ=255) cagccGATCGAAGGTTTCGGCAGCGGTACGTTCGTGCGTCGGGCAGGCGGAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGc > 1:254536/1‑148 (MQ=255) cagccGATCGAAGGATTCGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGa > 8:137269/1‑149 (MQ=255) aGGTTTCGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTgg < 7:301166/149‑1 (MQ=255) aGGATTCGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTgg < 7:137269/149‑1 (MQ=255) tttCGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCctgct < 8:320810/99‑1 (MQ=255) tttCGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCctgct > 7:320810/1‑99 (MQ=255) cGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAAt < 2:328844/148‑1 (MQ=255) cGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAAt < 3:220620/148‑1 (MQ=255) cGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAAt < 6:95913/148‑1 (MQ=255) cAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGc < 2:254536/149‑1 (MQ=255) aGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGc > 8:89933/1‑148 (MQ=255) gCGGTACGTTCGTGCGTCGGGCATGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGTTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGa < 7:207708/149‑1 (MQ=255) gTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTggg < 4:15536/132‑1 (MQ=255) gTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTggg > 3:15536/1‑132 (MQ=255) gTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAg > 3:115581/1‑149 (MQ=255) gCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTg > 7:107498/1‑149 (MQ=255) gTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTgg > 6:285951/1‑103 (MQ=255) gTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTgg < 5:285951/103‑1 (MQ=255) ggCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGc > 3:123803/1‑149 (MQ=255) gC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGcc > 6:220857/1‑131 (MQ=255) gC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGcc < 5:220857/131‑1 (MQ=255) gAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAg < 6:174061/149‑1 (MQ=255) gcCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGctcct > 4:68840/1‑149 (MQ=255) tgtTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCaa < 5:85917/149‑1 (MQ=255) tttCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTg < 4:296506/99‑1 (MQ=255) tttCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTg > 3:296506/1‑99 (MQ=255) tCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAggg > 4:85875/1‑148 (MQ=255) tCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAggg > 8:60037/1‑148 (MQ=255) cAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGc < 7:89933/148‑1 (MQ=255) ggTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGc > 6:191514/1‑149 (MQ=255) ggACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGc < 3:115792/149‑1 (MQ=255) aCAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCt > 6:223177/1‑148 (MQ=255) aCAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTg < 5:33154/149‑1 (MQ=255) aGCAACGCACTGGGTGACGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGa > 6:70525/1‑148 (MQ=255) cAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATc < 2:197314/73‑1 (MQ=255) cAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATc > 1:197314/1‑73 (MQ=255) cAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATc > 1:229137/1‑148 (MQ=255) aaCGCACTGGTTGCCTGCACCGCCATCCTGCTGGCTGAGGGAGCGCCGTTGCAACCTGGGCTTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTg < 4:105178/108‑1 (MQ=255) aaCGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTg > 3:105178/1‑108 (MQ=255) aaCGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCaa > 2:234168/1‑149 (MQ=255) aaCGCACTGGCTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCaa > 8:122034/1‑149 (MQ=255) aCGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCAAc < 5:223177/149‑1 (MQ=255) cGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCAACg < 4:123803/149‑1 (MQ=255) cACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCAACGGc < 3:85875/149‑1 (MQ=255) cACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCAACGGc < 4:293852/149‑1 (MQ=255) aCTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCAAc < 6:62586/145‑1 (MQ=255) aCTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCAAc > 5:62586/1‑145 (MQ=255) aCTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCAACGGCt > 2:118359/1‑149 (MQ=255) aCTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCAACGGCt < 2:229137/149‑1 (MQ=255) tGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGTTCAATGTGAGAATGGCCCGCAGTGGCGTTCTGTTAAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCACCggaatg > 4:145716/1‑145 (MQ=255) tgccgcagccagcAGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCt > 1:129112/6‑125 (MQ=255) ccGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCAAc < 6:263350/131‑1 (MQ=255) ccGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCAAc > 5:263350/1‑131 (MQ=255) cGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCAACGGCtt < 2:28464/135‑1 (MQ=255) cGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCAACGGCtt > 1:28464/1‑135 (MQ=255) cGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCAACGGCTTGCTCGACGGGCGTa < 1:133512/149‑1 (MQ=255) ccAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCAACGGCTTGCTCGACGGGCGTAg > 4:73766/1‑148 (MQ=255) aGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCAACGGCTTGCTCGACGGGCGTAGCAc > 3:53672/1‑149 (MQ=255) ccTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCAACGGCTTGCTCGACGGGCGTAGCACCg < 7:122034/149‑1 (MQ=255) ctgctgGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCAACGGCTTGCTCGACGGGCGTAGCACCGt > 6:218159/1‑149 (MQ=255) | AGGGTGACCAGTTCGAGTGTCGTCTGAGCCAGCCGATCGAAGGTTTCGGCAGCGGTACGTTCGTGCGTCGGGCAGGC‑GAGCAGCCGGTGTTTCAGCTGCGGTCGGACAGCAACGCACTGGGTGCCGGCACCGCCAGCCTGCTGGCTGCGGCAGCGCCGTGGCAACCTGGGCGTGGCGATATCAACTTGGGCAATGTGCGAATGGCCCGCAGTGGCGTGCTGTTCAGCTCCTCCCAAGGGCAGGCCAGCCGGCTGATCAACGGCTTGCTCGACGGGCGTAGCACCGT > NC_002947/1245758‑1246043 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |