Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,278,482 A→T 6.1% intergenic (‑309/+254) PP_5465 ← / ← PP_1117 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,278,4820AT 6.1% 200.8 / 2.8 66intergenic (‑309/+254)PP_5465/PP_1117hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (26/36);  new base T (2/2);  total (28/38)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.06e-01

AAGATTGCGCTATGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTCAAGGCCATGGA  >  NC_002947/1278335‑1278629
                                                                                                                                                    |                                                                                                                                                   
aaGATTGCGCTATGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACa                                                                                                                                                     >  8:140355/1‑148 (MQ=255)
    ttGCGCTATGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGt                                                                                                                                                 <  2:96332/148‑1 (MQ=255)
        gcTATGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCtt                                                                                                                                            <  7:40893/149‑1 (MQ=255)
        gcTATGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCtt                                                                                                                                            >  2:306932/1‑149 (MQ=255)
         cTATGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTa                                                                                                                                           >  4:168483/1‑149 (MQ=255)
            tGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATgg                                                                                                                                        <  1:306932/149‑1 (MQ=255)
            tGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATg                                                                                                                                         <  3:268284/148‑1 (MQ=255)
                cTACGGACAATGAAGAGCAAGAGCAGAAGCTTGAGTCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAg                                                                                                                                     >  1:46933/1‑149 (MQ=255)
                cTACGGACAATGAAGAGCAAGAGCAGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACa                                                                                                                                                     <  2:11536/132‑1 (MQ=255)
                 tACGGACAATGAAGAGCAAGAGCAGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACTTTGTCTCTTac                                                                                                                                          >  8:107620/1‑141 (MQ=255)
                 tACGGACAATGAAGAGCAAGAGCAGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACTTTGTCTCTTac                                                                                                                                          <  7:107620/142‑2 (MQ=255)
                   cGGACAATGAAGAGCAAGAGCAGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTggg                                                                                                                                 >  6:81064/1‑149 (MQ=255)
                    ggACAATGAAGAGCAAGAGCAGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACTTTGTCTCTTa                                                                                                                                           <  4:278186/138‑1 (MQ=255)
                    ggACAATGAAGAGCAAGAGCAGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACTTTGTCTCTTa                                                                                                                                           >  3:278186/1‑138 (MQ=255)
                    ggACAATGAAGAGCAAGAGCAGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGt                                                                                                                                >  4:152735/1‑149 (MQ=255)
                    ggACAATGAAGAGCAAGAGCAGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGt                                                                                                                                <  3:16946/149‑1 (MQ=255)
                             agagcaagagcaGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTc                                                                                                                        <  5:48803/148‑1 (MQ=255)
                              gagcaagagcaGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTc                                                                                                                        >  2:281616/1‑147 (MQ=255)
                              gagcaagagcaGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCaa                                                                                                                      <  6:258300/149‑1 (MQ=255)
                                gcaagagcaGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGCTGTCAAGt                                                                                                                    <  1:196832/149‑1 (MQ=255)
                                     agcaGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGata                                                                                                                >  8:1732/1‑148 (MQ=255)
                                        aGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCt                                                                                                             >  4:118371/1‑148 (MQ=255)
                                           aGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGAt                                                                                                          <  3:168483/148‑1 (MQ=255)
                                                 a‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGa                                                                                                    <  5:245606/148‑1 (MQ=255)
                                                 a‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGa                                                                                                    <  5:241307/148‑1 (MQ=255)
                                                   tCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACTGTACGTCAGAAACGGGAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGAt                                                                                                   <  5:275022/148‑1 (MQ=255)
                                                   tCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCTCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGAt                                                                                                   <  7:140355/148‑1 (MQ=255)
                                                       tgtAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGc                                                                                                <  2:37932/147‑1 (MQ=255)
                                                         tAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTg                                                                                                                   >  5:177326/1‑126 (MQ=255)
                                                         tAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTg                                                                                                                   <  6:177326/126‑1 (MQ=255)
                                                         tAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACa                                                                                            <  3:152735/149‑1 (MQ=255)
                                                             attaattaTTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAg                                                                                        >  7:192810/1‑149 (MQ=255)
                                                             attaattaTTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAg                                                                                        <  2:46933/149‑1 (MQ=255)
                                                              ttaattaTTATAAATCAACATCCTGATAGTCAAGTGTTGACTGACGGTACGTAAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGAGGGTTAGTTGACAAGTGATATCTGATAGCCGATCGATACATGAgg                                                                                       >  1:223362/1‑149 (MQ=255)
                                                               taattaTTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGAt                                                                                                          >  7:139899/1‑129 (MQ=255)
                                                               taattaTTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGAt                                                                                                          <  8:139899/129‑1 (MQ=255)
                                                                 attattATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTg                                                                                    <  5:81064/149‑1 (MQ=255)
                                                                      tataAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACAtt                                                                               >  3:88693/1‑149 (MQ=255)
                                                                      tataAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACAtt                                                                               >  5:89129/1‑149 (MQ=255)
                                                                       ataAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACAtt                                                                               <  6:89129/148‑1 (MQ=255)
                                                                        taAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGatat                                                                                                               >  6:206162/1‑115 (MQ=255)
                                                                        taAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGatat                                                                                                               <  5:206162/115‑1 (MQ=255)
                                                                              aaCATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGtt                                                                                                                           <  5:284177/97‑1 (MQ=255)
                                                                              aaCATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGtt                                                                                                                           >  6:284177/1‑97 (MQ=255)
                                                                              aaCATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACtt                                                                       <  1:281616/149‑1 (MQ=255)
                                                                                 aTCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCg                                                                    <  7:1732/149‑1 (MQ=255)
                                                                                    cTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGtt                                                                  <  4:88693/148‑1 (MQ=255)
                                                                                           tGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAAc                                                                         <  8:110095/134‑1 (MQ=255)
                                                                                           tGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAAc                                                                         >  7:110095/1‑134 (MQ=255)
                                                                                            gAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCa                                                         >  4:68998/1‑149 (MQ=255)
                                                                                            gAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCa                                                         >  3:114305/1‑149 (MQ=255)
                                                                                                     ccTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATaga                                                 <  8:137208/148‑1 (MQ=255)
                                                                                                         aCGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGa                                                                                                           <  6:194289/86‑1 (MQ=255)
                                                                                                         aCGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGtt                                              <  3:68998/147‑1 (MQ=255)
                                                                                                             tACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCtgtg                                         >  1:227365/1‑148 (MQ=255)
                                                                                                                   aGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACTGTGCATTGATAGAGTTCTGTGCAGaaa                                   >  4:186563/1‑148 (MQ=255)
                                                                                                                      aaCCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATcc                                <  7:117887/148‑1 (MQ=255)
                                                                                                                                ccAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGaaa                     >  7:171396/1‑149 (MQ=255)
                                                                                                                                      ggAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGc               <  4:114305/149‑1 (MQ=255)
                                                                                                                                         gCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTc             >  1:120164/1‑148 (MQ=255)
                                                                                                                                          cGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTCaa           <  3:118371/149‑1 (MQ=255)
                                                                                                                                            tAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTCAAgg         <  8:171396/149‑1 (MQ=255)
                                                                                                                                             aaGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTCAAGGc        >  6:267235/1‑149 (MQ=255)
                                                                                                                                                agaCAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTCAAGGCCAt     <  8:192810/149‑1 (MQ=255)
                                                                                                                                                 gaCAAAGTCTCTTATTGGAGTGGGTTAGTTGTCAAGTGATATCTGATATCCGATGCATACATGAGGTTGACATTGTCAACTTGCGTTGACCGTTCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTCAAGGCCAt     <  3:172341/148‑1 (MQ=255)
                                                                                                                                                  aCAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTCAAGGCCATg    >  7:112327/1‑148 (MQ=255)
                                                                                                                                                  aCAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGCCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGAAGAAATCCGTCACTTGAAATGTGGCTCAATGACATga   >  4:172341/1‑148 (MQ=255)
                                                                                                                                                   cAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTCAAGGCCATGGa  <  5:267235/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
AAGATTGCGCTATGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGA‑TCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTCAAGGCCATGGA  >  NC_002947/1278335‑1278629

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑