| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,293,255 | T→G | 5.8% | A286A (GCT→GCG) | PP_1128 → | OmpA family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,293,255 | 0 | T | G | 5.8% | 204.3 / 2.1 | 65 | A286A (GCT→GCG) | PP_1128 | OmpA family protein |
| Reads supporting (aligned to +/- strand): ref base T (34/27); new base G (2/2); total (36/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.35e-01 | |||||||||||
CGCCGAGGGCCGCGCCCTGAACCGCCGCGTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGACAAGAAAGTAG > NC_002947/1293108‑1293403 | cgcCGAGGGCCGCGCCCTGAACCGCCGCGTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTg < 4:99246/149‑1 (MQ=255) cGAGGGCCGCGCCCTGAACCGCCGCGTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGcc > 5:261043/1‑148 (MQ=255) ccGCGCCCTGAACCGCCGCGTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCGGccttggcag > 5:227858/1‑142 (MQ=255) cccTGAACCGCCGCGTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCGGCCTTGGCAGCtggt < 6:227858/149‑1 (MQ=255) ccTGAACCGCCGCGTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCtggtg > 5:110704/1‑149 (MQ=255) tGAACCGCCGCGTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACAAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCtggtgg > 3:64639/1‑148 (MQ=255) gAACCGCCGCGTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGc > 6:305725/1‑148 (MQ=255) gAACCGCCGCGTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGc > 6:274913/1‑148 (MQ=255) ccgcGTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTg > 6:327568/1‑149 (MQ=255) gAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTc > 3:190433/1‑147 (MQ=255) aCCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCgaa < 5:274913/149‑1 (MQ=255) aCCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCgaa < 5:305725/149‑1 (MQ=255) aCCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCgaa < 6:110704/149‑1 (MQ=255) cccGCAAAACACCATGGTCGCACTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCgaag > 4:222558/1‑148 (MQ=255) ccGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCaa < 3:135819/134‑1 (MQ=255) ccGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCaa > 4:135819/1‑134 (MQ=255) gCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GTCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAAc < 2:268594/149‑1 (MQ=255) cAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAAc > 1:253680/1‑149 (MQ=255) aaaaCACCATGGTCGCGCTGCTGGCCAAATAGCAGCAGGCCGCCAC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATTCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCt < 4:64639/149‑1 (MQ=255) acacCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTa < 5:334758/149‑1 (MQ=255) cATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCt > 4:300818/1‑115 (MQ=255) cATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCt < 3:300818/115‑1 (MQ=255) cATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGCTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCAGTAGcc > 3:59742/1‑148 (MQ=255) aTGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCaa < 4:178647/149‑1 (MQ=255) tGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAg > 5:199853/1‑149 (MQ=255) tgGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCt < 2:253680/149‑1 (MQ=255) ggCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTg > 8:102400/1‑149 (MQ=255) gCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCgaa > 6:102264/1‑119 (MQ=255) gCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCgaa < 5:102264/119‑1 (MQ=255) ccAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGc > 2:54163/1‑148 (MQ=255) aaTACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAg < 6:235131/149‑1 (MQ=255) aTACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGa > 7:283266/1‑149 (MQ=255) tACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGAc < 4:190433/149‑1 (MQ=255) cagcagGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTg > 5:320922/1‑148 (MQ=255) gccgccCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCa > 6:268830/1‑148 (MQ=255) ccgccCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGcc > 2:166007/1‑146 (MQ=255) gccCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGa > 2:17041/1‑148 (MQ=255) c‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGaaaa > 7:29868/1‑147 (MQ=255) ggCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAg < 6:261043/149‑1 (MQ=255) gCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGcc < 8:29868/149‑1 (MQ=255) ccGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGc > 2:211527/1‑149 (MQ=255) cGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGc < 8:265670/97‑1 (MQ=255) cGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGc > 7:265670/1‑97 (MQ=255) cTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGc < 8:283266/149‑1 (MQ=255) aTGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGAATGCAGCCAAGAAAAAAGCt > 8:253448/1‑132 (MQ=255) gtggCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTgccgc < 6:320922/149‑1 (MQ=255) tGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGaaa < 3:222558/149‑1 (MQ=255) aGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCt > 2:79316/1‑149 (MQ=255) ggATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTg > 7:203196/1‑149 (MQ=255) gATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGc < 8:203196/149‑1 (MQ=255) ccAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGtt < 7:301451/149‑1 (MQ=255) cAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGTGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGtt > 3:25873/1‑148 (MQ=255) cAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGtt > 4:95212/1‑148 (MQ=255) aaGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGc > 7:301990/1‑74 (MQ=255) aaGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGc < 8:301990/74‑1 (MQ=255) aaGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAG‑AAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGa > 2:344970/1‑148 (MQ=255) aGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGAc < 6:199853/149‑1 (MQ=255) ggCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGACa < 1:166007/149‑1 (MQ=255) gCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGAc > 1:18563/1‑147 (MQ=255) gCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGACaa < 1:54163/149‑1 (MQ=255) cACCAGCGGCCTTGGCAGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTgcc > 6:156554/1‑125 (MQ=255) cACCAGCGGCCTTGGCAGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTgcc < 5:156554/125‑1 (MQ=255) cAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGACAAGa > 1:245162/1‑148 (MQ=255) cAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACTCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGACAAGaaa > 2:236577/1‑149 (MQ=255) cAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGACAAGaaa < 3:95212/149‑1 (MQ=255) tGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGACAAGAAAGTAg > 2:325898/1‑149 (MQ=255) | CGCCGAGGGCCGCGCCCTGAACCGCCGCGTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCC‑GGCACCCGCCCCGGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGC‑GGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGACAAGAAAGTAG > NC_002947/1293108‑1293403 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |