Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,320,300 T→A 7.3% T811S (ACA→TCA)  PP_1154 ← sensory box protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,320,3000TA 7.3% 192.6 / 4.9 69T811S (ACA→TCA) PP_1154sensory box protein
Reads supporting (aligned to +/- strand):  ref base T (30/34);  new base A (3/2);  total (33/36)
Fisher's exact test for biased strand distribution p-value = 6.65e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.01e-01

CTGTGCAGTGTTTTGGGAGGGTTGGTGCAACAACGCCGTCAACCCGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCTTGATGCTGTCGAACGGGTAGGTACGCAGGTAGCCCAACGACGAA  >  NC_002947/1320154‑1320448
                                                                                                                                                  |                                                                                                                                                    
cTGTGCAGTGTTTTGGGAGGGTTGGTGCAACAACGCCGTCAACCCGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGctgtca                                                                                                                                                    <  4:100691/149‑1 (MQ=255)
               ggAGGGTTGGTGCAACAACGCCGTCAACCCGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGACACTGTCAGCCCCAtcg                                                                                                                                     >  8:25644/1‑149 (MQ=255)
                    gTTGGTGCAACAACGCCGTCAACCCGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCAtcgcctcg                                                                                                                                <  6:162638/149‑1 (MQ=255)
                    gTTGGTGCAACAACGCCGTCAACCCGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCAtcgcctcg                                                                                                                                >  2:156827/1‑149 (MQ=255)
                     ttGGTGCAACAACGCCGTCAACCCGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCAtcgcctcgc                                                                                                                               <  5:115851/149‑1 (MQ=255)
                          gCAACAACGCCGTCAACCCGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCGCGCCCAgg                                                                                                                          >  3:28543/1‑149 (MQ=255)
                             acaacGCCGTCAACCCGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGtt                                                                                                                        >  8:301296/1‑148 (MQ=255)
                              caacGCCGTCAACCCGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTtga                                                                                                                      <  6:135850/149‑1 (MQ=255)
                               aacGCCGTCAACCCGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTtgat                                                                                                                     >  5:141861/1‑149 (MQ=255)
                                  gCCGTCAACCCGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTgatgat                                                                                                                  <  7:301296/149‑1 (MQ=255)
                                           ccGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGAc                                                                                                         <  1:156827/149‑1 (MQ=255)
                                            cGGCGTTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGAc                                                                                                         <  7:140524/148‑1 (MQ=255)
                                            cGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGAc                                                                                                         >  5:22142/1‑148 (MQ=255)
                                                 cTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAgc                                                                                                   <  3:105999/149‑1 (MQ=255)
                                                         gggCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGc                                                                                           >  8:293677/1‑149 (MQ=255)
                                                           gCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTg                                                                                         >  5:264521/1‑149 (MQ=255)
                                                             ttGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACcac                                                                                                      >  4:77588/1‑134 (MQ=255)
                                                             ttGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACcac                                                                                                      <  3:77588/134‑1 (MQ=255)
                                                               gCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTgcc                                                                                       <  6:22142/147‑1 (MQ=255)
                                                                cTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTgccgcc                                                                                    >  7:6942/1‑149 (MQ=255)
                                                                 tCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTg                                                                                         >  3:193687/1‑143 (MQ=255)
                                                                 tCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTg                                                                                         <  4:193687/143‑1 (MQ=255)
                                                                   aGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCgtt                                                                                 <  7:307717/149‑1 (MQ=255)
                                                                      tAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCgttgtt                                                                              <  6:264521/149‑1 (MQ=255)
                                                                      tAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGACACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCgttgtt                                                                              <  7:25644/149‑1 (MQ=255)
                                                                           gCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCgttgttgtt                                                                           >  4:279787/1‑147 (MQ=255)
                                                                             cTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTcagg                                                                       <  8:286456‑M2/149‑5 (MQ=255)
                                                                                 ctcttGATGGCAGCGGGCCTTTGCCAGCGCCTTGACGGGATGTGCGCTTTCGACGGCTTCGGCTGTCCCTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGaacaacaacggcggcagcgaccgcgctgtggtccaggcca                                                                    <  8:268684‑M1/146‑41 (MQ=255)
                                                                                  aCTTCTTTGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGaacaacaacggcggcagcgaccgcgctgtggtccaggccatc                                                                  <  6:190328‑M1/149‑43 (MQ=255)
                                                                                   cTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGaacaacaacggcggcagcgaccgcgctgtg                                                                              >  1:205763‑M1/1‑106 (MQ=255)
                                                                                   cTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGaacaacaacggcggcagcgaccgcgctgtg                                                                              <  2:205763‑M1/136‑31 (MQ=255)
                                                                                   cTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCgttgtt                                                                              <  2:339506/136‑1 (MQ=255)
                                                                                   cTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCgttgtt                                                                              >  1:339506/1‑136 (MQ=255)
                                                                                    ttCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGATGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACACCGCGGACGCTGCCGCCGTTGTTGTTCAGGCCGCtga                                                                >  6:160825/1‑149 (MQ=255)
                                                                                      cATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCtga                                                                <  8:27839/147‑1 (MQ=255)
                                                                                       aTGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCtgatg                                                              >  3:23048/1‑148 (MQ=255)
                                                                                       aTGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCtgatg                                                              >  7:88590/1‑148 (MQ=255)
                                                                                            aGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAgcgc                                                        <  8:6942/149‑1 (MQ=255)
                                                                                                gTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGt                                                    <  1:82408/149‑1 (MQ=255)
                                                                                                  ccTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTc                                                   >  1:176627/1‑148 (MQ=255)
                                                                                                   cTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGAGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGa                                                 >  1:310258/1‑149 (MQ=255)
                                                                                                    ttttCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGaacaacaacggcggcagcgaccgcgctgtggtccaggc                                                                      >  2:7224‑M1/1‑89 (MQ=255)
                                                                                                    ttttCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGaacaacaacggcggcagcgaccgcgctgtggtccaggc                                                                      <  1:7224‑M1/127‑39 (MQ=255)
                                                                                                    ttttCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAgcg                                                                                                  >  3:169214/1‑99 (MQ=255)
                                                                                                    ttttCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGt                                                    >  3:163656/1‑145 (MQ=255)
                                                                                                    ttttCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGt                                                    <  4:163656/145‑1 (MQ=255)
                                                                                                    ttttCCAGCGACTTGAGTTGATGTTCGCCTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAgcg                                                                                                  <  4:169214/99‑1 (MQ=255)
                                                                                                        ccAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAgcgc                                                        <  3:136314/137‑1 (MQ=255)
                                                                                                        ccAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAgcgc                                                        >  4:136314/1‑137 (MQ=255)
                                                                                                        ccAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCtt                                             >  2:285586/1‑148 (MQ=255)
                                                                                                              aCTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCgtt                                                                                 >  6:229422/1‑106 (MQ=255)
                                                                                                              aCTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCgtt                                                                                 <  5:229422/106‑1 (MQ=255)
                                                                                                                ttGAGTTGATTTTCGCTTTCCACGCCTTCGGATGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGGCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGTCCGCTGATGAAGCGCTTGTCGATCTTGATGCTGTc                                    <  5:160825/149‑1 (MQ=255)
                                                                                                                ttGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCTTGATGCTGTc                                    <  4:23048/149‑1 (MQ=255)
                                                                                                                    gTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCTTGATGCTGTCGAAc                                >  8:80171/1‑149 (MQ=255)
                                                                                                                     ttGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCTTGATGCTGTCGAACg                               >  3:220941/1‑149 (MQ=255)
                                                                                                                        aTGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCTTGATGCTGTCGAACGggt                            <  3:279787/149‑1 (MQ=255)
                                                                                                                        aTGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCTTGATGCTGTCGAACGggt                            <  7:286456/149‑1 (MQ=255)
                                                                                                                        aTGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCTTGATGCTGTCGAACGggt                            <  7:80171/149‑1 (MQ=255)
                                                                                                                         tGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCTTGATGCTGTCGAACGggt                            <  7:293677/148‑1 (MQ=255)
                                                                                                                           ttCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCTTGATGCTGTCGAACGggtagg                         >  5:60566/1‑149 (MQ=255)
                                                                                                                              gCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCTTGATGCTGTCGAACGGGTAGGTAc                      >  7:243948/1‑149 (MQ=255)
                                                                                                                                  tCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCTTGATGCTGTCGAACGGGTAGGTACGc                    <  8:88590/147‑1 (MQ=255)
                                                                                                                                    cACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCTTGATGCTGTCGAACGGGTAGGTACGCAgg                 >  7:169410/1‑148 (MQ=255)
                                                                                                                                     accccTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCTTGATGCTGTCGAACGGGTAGGTACGCAGGTa               <  8:169410/146‑1 (MQ=255)
                                                                                                                                       gCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCTTg                                            <  2:95773/118‑1 (MQ=255)
                                                                                                                                       gCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCTTg                                            >  1:95773/1‑118 (MQ=255)
                                                                                                                                        gatggggCTGACAGTGACAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCTTGATGCTGTCGAACGGGTAGGTACGCAGGTAGcc            >  1:204344/6‑149 (MQ=255)
                                                                                                                                            gggCTGACAGTGACAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCTTGATGCTGTCGAACGggtaggta                       >  6:6150/2‑134 (MQ=255)
                                                                                                                                            gggCTGACAGTGACAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCTTGATGCTGTCGAACGggtaggta                       <  5:6150/133‑1 (MQ=255)
                                                                                                                                               ctgtcactgtcaGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCTTGATGCTGTCGAACGGGTAGGTACGCAGGTAGCCCAacgac     >  7:255198/1‑149 (MQ=255)
                                                                                                                                                  tcactgtcaGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCTTGATGCTGTCGAACGGGTAGGTACGCAGGTAGCCCAACGACGaa  >  7:90466/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
CTGTGCAGTGTTTTGGGAGGGTTGGTGCAACAACGCCGTCAACCCGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGGACCACAGCGCGGTCGCTGCCGCCGTTGTTGTTCAGGCCGCTGATGAAGCGCTTGTCGATCTTGATGCTGTCGAACGGGTAGGTACGCAGGTAGCCCAACGACGAA  >  NC_002947/1320154‑1320448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑