| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,392,043 | T→C | 6.1% | intergenic (+74/‑41) | aspS → / → PP_1214 | aspartate‑‑tRNA ligase/transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,392,043 | 0 | T | C | 6.1% | 244.5 / 3.9 | 82 | intergenic (+74/‑41) | aspS/PP_1214 | aspartate‑‑tRNA ligase/transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (35/42); new base C (2/3); total (37/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.45e-01 | |||||||||||
CCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGTGGATCCGTGAACTGACGGTCGCTGC > NC_002947/1391896‑1392190 | ccccTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATg > 5:250512/1‑149 (MQ=255) tGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATggggc > 2:309022/1‑149 (MQ=255) gCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATggggcgg < 4:48335/149‑1 (MQ=255) gCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATggggc < 2:45796/147‑1 (MQ=255) gCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCATGACggggcgg > 8:58406/1‑149 (MQ=255) aTGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATggggcgggg < 7:308229/149‑1 (MQ=255) gTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATggggcgggacg < 5:341661/148‑4 (MQ=255) gTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCg > 8:82507/1‑149 (MQ=255) gTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACAAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCATGACggggcgggacg < 2:313872/148‑4 (MQ=255) gACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCTTCCCGCCCCGTCATGGGGCGGGGCCtttt > 8:267076/1‑149 (MQ=255) gACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGttt < 3:59334/149‑1 (MQ=255) gACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGCCCCGCCCCATGACggggcgggacggga < 7:15763/148‑7 (MQ=255) aGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTc < 7:225968/149‑1 (MQ=255) gccTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCaaa < 7:87228/148‑1 (MQ=255) cccTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCaaa < 1:15939/149‑1 (MQ=255) ccTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAg > 3:236456/1‑149 (MQ=255) cTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATggggcggg < 6:101974/130‑1 (MQ=255) cTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATggggcggg > 5:101974/1‑130 (MQ=255) cTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAg > 8:34559/1‑148 (MQ=255) cgcgAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGAGGAGTGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGACATGGGGCGGGGCCGTTTGTGATTCAAAg > 1:107424/1‑148 (MQ=255) gcgAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTc < 4:88178/149‑1 (MQ=255) cgAACTGCTCATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCg < 5:200300/149‑1 (MQ=255) cacaTCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCg < 3:178230/148‑1 (MQ=255) cacaTCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCg < 8:163491/148‑1 (MQ=255) cacaTCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGt > 8:248679/1‑149 (MQ=255) cacaTCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGt > 5:109201/1‑149 (MQ=255) cacaTCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGt > 8:186220/1‑149 (MQ=255) acaTCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGtt < 7:248679/149‑1 (MQ=255) gACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCt < 4:204730/149‑1 (MQ=255) cTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTgg < 7:82507/149‑1 (MQ=255) cgcgAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCa > 2:276290/1‑149 (MQ=255) gcgAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCAt > 8:107938/1‑149 (MQ=255) cgAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCAtt < 4:236456/149‑1 (MQ=255) cAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTcc > 7:167431/1‑147 (MQ=255) cAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCaa < 7:107938/149‑1 (MQ=255) aGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTa > 3:72307/1‑132 (MQ=255) aGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTa < 4:72307/132‑1 (MQ=255) gACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGt < 2:107424/149‑1 (MQ=255) aCCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGCCCCGCCCCATGACggggcgggacgg < 4:317630/101‑5 (MQ=38) aCCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGCCCCGCCCCATGACggggcgggacgg > 3:317630/1‑97 (MQ=38) ccAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTgg < 7:186220/149‑1 (MQ=255) cAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTggg < 1:154159/149‑1 (MQ=255) cAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTggg < 1:309022/149‑1 (MQ=255) tCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAAc < 2:82317/149‑1 (MQ=255) cGAGTAAGCAGTCCCCGGGCGCATCAACAA‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCAGACCCGCCCACTAATGGGGAGGGGCCGTTTGTGAATCAAATGATTCGTAGTACTTATGGATGGAAATTACAAGTAGGCGAAc > 2:309757/1‑148 (MQ=255) aGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATc < 7:34559/149‑1 (MQ=255) aGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAg > 7:227343/1‑148 (MQ=255) gCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCa > 1:260409/1‑149 (MQ=255) gCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCa > 1:323417/1‑149 (MQ=255) gCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCa < 2:323417/149‑1 (MQ=255) cAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCAc < 6:250512/149‑1 (MQ=255) gTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGGTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCg > 3:22626/1‑149 (MQ=255) acgcaaaggCGCATCCATGT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCAcc < 5:188701/141‑1 (MQ=255) acgcaaaggCGCATCCATGT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCAcc > 6:188701/8‑148 (MQ=255) ccGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCa > 5:275743/1‑147 (MQ=255) aT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCaa < 7:135561/125‑1 (MQ=255) aT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCaa > 8:135561/1‑125 (MQ=255) a‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGcc > 6:315011/1‑146 (MQ=255) a‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGcc > 6:309838/1‑146 (MQ=255) a‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAag < 1:276290/149‑1 (MQ=255) tGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCaa > 7:122083/1‑147 (MQ=255) tGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAaga < 8:122083/149‑1 (MQ=255) cTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGc < 6:109201/149‑1 (MQ=255) tGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCaa < 6:275743/148‑1 (MQ=255) cGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGt > 7:88987/1‑149 (MQ=255) cAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAg < 8:88987/149‑1 (MQ=255) aGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGt < 2:260409/149‑1 (MQ=255) aGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGt > 3:294514/1‑149 (MQ=255) ggTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGTg < 3:303803/149‑1 (MQ=255) ttttttCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGTGGa > 1:54591/1‑149 (MQ=255) tttCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGTGGATc < 8:167431/148‑1 (MQ=255) cccgtcccgCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCTAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGTGGATCCGt < 7:267076/148‑1 (MQ=255) ccgtcccgCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCAtt < 2:292197/70‑1 (MQ=255) ccgtcccgCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCAtt > 1:292197/1‑70 (MQ=255) gCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGcc > 2:282654/1‑107 (MQ=255) gCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGTGGATCCGTGAACTGACg > 2:324657/1‑149 (MQ=255) gCCCCGTCATGCGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGcc < 1:282654/107‑1 (MQ=255) ccGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGTGGATCCGTGAACTGACGGTc > 7:4275/1‑149 (MQ=255) cGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGTGGATCCGTGAACTGACGGTCg > 7:76677/1‑149 (MQ=255) gTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGTGGATCCGTGAACTGACGGTCGc < 4:294514/149‑1 (MQ=255) gTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGTGGATCCGTGAACTGACGGTCGc < 8:47101/149‑1 (MQ=255) aTGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGTGGATCCGTGAACTGACGGTCGCTGc > 6:286124/1‑149 (MQ=255) | CCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACAT‑‑GGA‑TGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGTGGATCCGTGAACTGACGGTCGCTGC > NC_002947/1391896‑1392190 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |