| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 36,171 | A→T | 6.5% | intergenic (+56/+27) | PP_0032 → / ← PP_0033 | hypothetical protein/undecaprenyl‑glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 36,171 | 0 | A | T | 6.5% | 328.5 / 7.5 | 110 | intergenic (+56/+27) | PP_0032/PP_0033 | hypothetical protein/undecaprenyl‑glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base A (54/48); new base T (3/4); total (58/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.48e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
GATGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGAT > NC_002947/36029‑36318 | aTGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTg < 2:313680/149‑1 (MQ=255) ttCGGACCAGAACAAACAACAAGTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCttt < 6:222966/147‑1 (MQ=255) cGGACCAGAACAAACAACAATTCGCTCAAGA‑GCAAAAGAAAGAAAGCAATGATTTTAAGTAACAAGCCGACAATAAATCGGCGGTTAAATAGGACTTCAAATGACGAAATAAATCGACAAAAAAGCCAGGGTAAAACCTGGCtttt < 7:50769/146‑1 (MQ=255) aCCAGAACAAACAACAAGTCGCTCAAGAGGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTtg‑tg > 1:20852/1‑149 (MQ=255) ccAGAACAAACCACAAGTCGCTCAAGT‑GCAATATAATGAATGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGAGTTTAAATACGACTTCAAATTACCAAAGAAATCGACAAAAAATCCAGCTTTTACCCTGGCTTTTTtg‑tct < 8:197931/148‑3 (MQ=255) ccAGAACAAACAACAAGTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCt > 3:108146/1‑149 (MQ=255) ccAGAACAAACAACAAGTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCt < 2:335737/149‑1 (MQ=255) cAGAACAAACAACAAGTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCtt > 8:103846/1‑149 (MQ=255) cAGAACAAACAACAAGTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCtt < 4:66636/149‑1 (MQ=255) gAACAAACAACAAGTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGCtttttt > 1:340454/1‑141 (MQ=255) gAACAAACAACAAGTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGCtttttt < 2:340454/141‑1 (MQ=255) aacaaacaACAAGTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTgg > 2:71709/1‑148 (MQ=255) caaacaaCAAGTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAAt > 4:94265/1‑149 (MQ=255) caaacaaCAAGTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAAt < 5:107887/149‑1 (MQ=255) caaacaaCAAGTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCAAGGGTGAAACCTGGCTTTTTTG‑GGCTTGGatt > 8:276159/1‑147 (MQ=255) acaacaAGTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAAtt > 3:61488/1‑147 (MQ=255) aacaaGTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCt > 7:190475/1‑124 (MQ=255) aacaaGTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCt < 8:190475/124‑1 (MQ=255) caaGTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTtg‑t > 2:116160/1‑133 (MQ=255) caaGTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTtg‑t < 1:116160/133‑1 (MQ=255) caaGTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCt < 5:231825/149‑1 (MQ=255) aaGTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCtt < 7:195421/149‑1 (MQ=255) gTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCg < 3:277963/149‑1 (MQ=255) gTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGCGTAAAACCTGCCTTTTTTG‑TGATTGGAATTTAGCCTTCg > 5:18547/1‑149 (MQ=255) cAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTa < 2:227626/136‑1 (MQ=255) cAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTa > 1:227626/1‑136 (MQ=255) aaGT‑GCAAAAGAAAGAAAGCTAGGATGGTAAGGAACAAGCCTACAATTAATCGGCGTTTAAATAGGAGTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCtt < 6:18547/147‑1 (MQ=255) aaGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGc > 5:217731/1‑149 (MQ=255) a‑gCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAg < 3:11850/149‑1 (MQ=255) aaaaGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCttttt < 2:314065/114‑1 (MQ=255) aaaaGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCg > 3:317433/1‑149 (MQ=255) agaaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGttt > 3:52008/1‑149 (MQ=255) aaagaaagCAAGGAT‑GTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGCGTAAATCCTGGCTGTTTTG‑TGCTTCGAATTTAGCCATCGTTCTTGAGAGGCGTTTCCg > 6:217820/1‑149 (MQ=255) gaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCa < 7:103846/149‑1 (MQ=255) aatgaacgATGGTAAGTAACAAGCCGACAATTAATCCGCGGTTAAATAGGACATCAAATCACGAAAGTAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCAtt < 5:231072/142‑1 (MQ=255) aagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCAtt < 4:108146/149‑1 (MQ=255) gCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGATGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTg < 1:71709/149‑1 (MQ=255) ggATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTtc < 3:94265/149‑1 (MQ=255) ggAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGc > 1:188988/1‑146 (MQ=255) gAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGa < 4:317433/149‑1 (MQ=255) gAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGa > 1:264987/1‑149 (MQ=255) gAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATCTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGa > 4:226222/1‑149 (MQ=255) aCAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGAcc > 1:184116/1‑149 (MQ=255) aaGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCt > 7:166118/1‑149 (MQ=255) aaGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCt < 2:264987/149‑1 (MQ=255) gCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCg > 7:271808/1‑149 (MQ=255) aCAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTc < 2:40175/99‑1 (MQ=255) aCAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTc > 1:40175/1‑99 (MQ=255) aCAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTtctc < 1:127184/131‑1 (MQ=255) aCAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTtctc > 2:127184/1‑131 (MQ=255) aCAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCAc > 3:276709/1‑149 (MQ=255) ggcggTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGTGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCgg < 4:61488/148‑1 (MQ=255) gcggTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCgggg < 1:234500/149‑1 (MQ=255) gTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGttt < 6:237368/102‑1 (MQ=255) ttAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGtt > 2:176478/1‑149 (MQ=255) tAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGtt < 1:73429/148‑1 (MQ=255) tAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGtt > 2:73429/1‑148 (MQ=255) aaTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTc < 6:193241/148‑1 (MQ=255) aaTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTATCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTc > 5:232991/1‑148 (MQ=255) aaTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCATTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTc > 5:296638/1‑148 (MQ=255) aaTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATCTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTcc < 3:226222/149‑1 (MQ=255) aaTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACATGGCTTTTTTG‑TGCTAGGAATTTAGCCTTCGTAATTGCGAGCCGTTTCCGCATTGCTTTATCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTc > 7:115302/1‑148 (MQ=255) aaTAGCACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGTGTAAAACCTGGCTTTTTTT‑TGCTTGGAATTTAGGCTTCGTTCTTGCGAGGCGTTTCCGCTTTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTc < 5:121836/148‑1 (MQ=255) aTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTcc > 6:321111/1‑148 (MQ=255) ggACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATg > 7:224106/1‑149 (MQ=255) gACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCGGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATgg > 2:264525/1‑149 (MQ=255) gACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATgg > 6:70003/1‑149 (MQ=255) aCTTCAAATGACTCAAGAAATCGACAAAAAAGCCCGCGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGc < 3:251440/149‑1 (MQ=255) ttCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCaa > 3:45510/1‑143 (MQ=255) ttCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCaa < 4:45510/143‑1 (MQ=255) ttCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCGGGGTTTTTTG‑TGCTTGGAATTTAGCCTTGGTTCTTGCGGGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCGTGTGGGGGGCGGTTCGGATGGcac > 8:239110/1‑149 (MQ=255) cAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCAcag > 2:257695/1‑149 (MQ=255) aaaTGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCAcag > 2:334071/1‑148 (MQ=255) aTGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCTGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCAcagcag < 5:276408/149‑1 (MQ=255) aTGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCggg < 3:115856/128‑1 (MQ=255) aCGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAg > 5:179272/1‑149 (MQ=255) cGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTTGCTTTTTTT‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAg < 8:115302/148‑1 (MQ=255) gaaagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCg > 4:122307/1‑121 (MQ=255) gaaagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCg > 4:127222/1‑121 (MQ=255) gaaagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCg < 3:127222/121‑1 (MQ=255) gaaagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCg < 3:122307/121‑1 (MQ=255) gaaagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGttt > 7:7547/1‑129 (MQ=255) gaaagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgct > 4:88026/1‑149 (MQ=255) gaaagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgct > 2:105759/1‑149 (MQ=255) gaaagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgct > 2:243287/1‑149 (MQ=255) aTCGACAAAAAAGCCAGGGTAAAACCTGGGTTTTTTG‑TGCTTGGAGTTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCtggctggc > 7:194979/1‑149 (MQ=255) aaaaaaGCCAGGTTTTACCCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgctgg > 6:220655/1‑138 (MQ=255) aaaaaaGCCAGGTTTTACCCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgctgg < 5:220655/138‑1 (MQ=255) aaaaaaGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGc > 5:315609/1‑149 (MQ=255) aaaaGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCtt > 8:313983/1‑149 (MQ=255) aaaaGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCtt < 1:257695/149‑1 (MQ=255) aaaGCGAGGGTAAACCCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGGGCGGGGCGGTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTc < 5:217820/149‑1 (MQ=255) aaGCCAGGTTTTACCCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCt > 2:289715/1‑146 (MQ=255) aaGCCAGGTTTTACCCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCt < 1:289715/146‑1 (MQ=255) aaGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCg < 2:184116/149‑1 (MQ=255) gCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGt < 3:48284/149‑1 (MQ=255) cAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGa < 8:166118/149‑1 (MQ=255) gggTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATc < 6:217731/149‑1 (MQ=255) gTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGa > 3:266533/1‑149 (MQ=255) tAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGAt < 4:52008/149‑1 (MQ=255) | GATGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGA‑GCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTG‑TGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGAT > NC_002947/36029‑36318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |