| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,744,262 | G→C | 9.0% | intergenic (‑51/+16) | PP_1541 ← / ← PP_1542 | putative Methyltransferase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,744,262 | 0 | G | C | 9.0% | 213.8 / 6.1 | 73 | intergenic (‑51/+16) | PP_1541/PP_1542 | putative Methyltransferase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (31/35); new base C (5/2); total (36/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTCTACGTCGCCTGGCGCGATATGGCCCGCGGCAATGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCAAGAGTCTCGTAGGGCGAC > NC_002947/1744119‑1744410 | gTCTACGTCGCCTGGCGCGATATGGCCCGCGGCAATGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAg > 1:299725/1‑149 (MQ=255)gTCTACGTCGCCTGGCGCGATATGGCCCGCGGCAATGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAg > 4:286549/1‑149 (MQ=255) cGTCGCCTGGCGCGATATGGCCCGCGGCAATGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCgg < 2:299725/149‑1 (MQ=255) gTCGCCTGGCGCGATATGGCCCGCGGCAATGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCggg > 8:98980/1‑149 (MQ=255) tCGCCTGGCGCGATATGGCCCGCGGCAATGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGa < 2:333721/149‑1 (MQ=255) tCGCCTGGCGCGATATGGCCCGCGGCAATGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGa < 2:338919/149‑1 (MQ=255) cGCCTGGCGCGATATGGCCCGCGGCAATGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAg < 5:117154/149‑1 (MQ=255) gCCTGGCGCGATATGGCCCGCGGCAATGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAgg < 3:286549/149‑1 (MQ=255) cgcgATATGGCCCGCGGCAATGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAgg < 4:111843/149‑1 (MQ=255) gATATGGCCCGCGGCAATGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCcg > 4:305912/1‑149 (MQ=255) tatGGCCCGCGGCAATGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCcgc < 6:130378/148‑1 (MQ=255) gCCCGCGGCAATGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAgg < 3:305912/148‑1 (MQ=255) gCCCGCGGCAATGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGgc > 3:175473/1‑149 (MQ=255) gCCCGCGGCAATGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCAGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGgc > 7:283770/1‑149 (MQ=255) ccGCGGCAATGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGgcgc < 5:42291/149‑1 (MQ=255) ccGCGGCAATGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGgcgc > 7:6271/1‑149 (MQ=255) ggCAATGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGgcgc < 3:180538/145‑1 (MQ=255) ggCAATGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGgcgc > 4:180538/1‑145 (MQ=255) cAATGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTg < 7:273080/149‑1 (MQ=255) aaTGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGa < 3:111965/137‑1 (MQ=255) aaTGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGa > 4:111965/1‑137 (MQ=255) aTGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTc < 8:274198/149‑1 (MQ=255) aTGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTc < 4:175473/149‑1 (MQ=255) gTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTc > 4:39539/1‑149 (MQ=255) gCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGTG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTg < 6:350732/149‑1 (MQ=255) gcgcGGCGTATGGGTCGATCTCGTTGTAATACGCAGACATACGGCTCATCGACCGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGCTTAGGACGCCAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTgg > 8:176903/1‑149 (MQ=37) gTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAgcg > 7:150652/1‑149 (MQ=255) aTCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGcttc > 6:283204/1‑149 (MQ=255) tctcGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGcttct > 7:46001/1‑149 (MQ=255) tcGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGt < 6:86428/130‑1 (MQ=255) tcGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGt > 5:86428/1‑130 (MQ=255) gTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTg > 2:63137/1‑148 (MQ=255) ttGTAATACGCAGCCATACGGCTCCTCGCCGGGTGAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTg > 1:46252/1‑148 (MQ=255) ttGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTa < 8:283770/149‑1 (MQ=255) gTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTa < 8:41634/147‑1 (MQ=255) gTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTa > 7:41634/1‑147 (MQ=255) gTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAg < 8:150652/148‑1 (MQ=255) aaTACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTg > 4:8798/1‑149 (MQ=255) aTACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTgg < 3:39539/149‑1 (MQ=255) aCGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGcc > 3:185154/1‑149 (MQ=255) gCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCtt > 8:67970/1‑149 (MQ=255) gCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCtt > 5:49339/1‑149 (MQ=255) aGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTgg < 8:6271/149‑1 (MQ=255) tcctcGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATg > 1:288832/1‑149 (MQ=255) tcctcGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATg > 1:237939/1‑149 (MQ=255) ctcGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATg < 6:329399/147‑1 (MQ=255) ctcGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGt < 2:237939/149‑1 (MQ=255) ctcGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGt > 5:102017/1‑149 (MQ=255) tcGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTc > 8:165855/1‑149 (MQ=255) ccGGG‑GAGGCGTTATCGTTGATGAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCGTGGCCTGGTGCAGCCGAAGCGCTTCGTTGTAGCTGGCGGTGGCCGCATTTATGGTCGGt > 8:224531/1‑149 (MQ=37) ggg‑gATGCGTTATCGTTCAATAGGTGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTTCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATTGTCGGTGc < 7:176903/149‑1 (MQ=38) gAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCa < 1:63137/149‑1 (MQ=255) gAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGAcc < 2:288832/148‑1 (MQ=255) aaTAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCTAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCt < 7:98980/148‑1 (MQ=255) aaTAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCg < 6:302792/127‑1 (MQ=255) aaTAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCt > 1:30065/1‑148 (MQ=255) aaTAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCt > 3:294042/1‑148 (MQ=255) aaTAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTc < 4:185154/149‑1 (MQ=255) tAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCaa < 4:294042/149‑1 (MQ=255) tAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCaa < 7:165855/149‑1 (MQ=255) gggAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCAagag > 2:124179/1‑149 (MQ=255) ctcccgcgcTGCCCGCCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGc < 2:304191/120‑1 (MQ=255) ctcccgcgcTGCCCGCCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGc > 1:304191/6‑125 (MQ=255) tcccgcgcTGCCCGCCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCAAGAGtc > 5:58412/5‑149 (MQ=255) tcccgcgcTGCCCGCCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCAAGAGt > 8:26118/5‑148 (MQ=255) ccgcgcTGCCCGCCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCAAGAGtctc > 8:93491/3‑149 (MQ=255) ccgcgcTGCCCGCCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCAAGAGt < 7:26118/144‑1 (MQ=255) ggCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCgg < 6:98451/132‑1 (MQ=255) ggCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCgg > 5:98451/1‑132 (MQ=255) cgcgcTGCCCGCCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCAAGAGTCTCg > 7:201754/2‑149 (MQ=255) cTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCAAGAGTCTCGTAgg < 2:46252/149‑1 (MQ=255) ggCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCAAGAGTCTCGTAGGGc < 6:49339/149‑1 (MQ=255) gCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCAAGAGTCTCGTAGGGc < 7:67970/148‑1 (MQ=255) gggCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCAAGAGTCTCGTAGGGCGAc < 3:8798/149‑1 (MQ=255) | GTCTACGTCGCCTGGCGCGATATGGCCCGCGGCAATGAGGTTGCGGAGCCACTGCGCGGCGTATGGGTCGATCTCGTTGTAATACGCAGCCATACGGCTCCTCGCCGGG‑GAGGCGTTATCGTTGAATAGGGGAAGGCGCTGGCGGGCAGCGCGGGAGGGTTAGGCCGCGAGGCGCTTCTTGTCTGCTCGGCCCTTGGCCTGGTGCAGCCGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCAAGAGTCTCGTAGGGCGAC > NC_002947/1744119‑1744410 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |