| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,802,082 | A→T | 5.5% | Q689L (CAG→CTG) | dnaEA → | DNA polymerase III subunit alpha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,802,082 | 0 | A | T | 5.5% | 224.3 / 2.4 | 72 | Q689L (CAG→CTG) | dnaEA | DNA polymerase III subunit alpha |
| Reads supporting (aligned to +/- strand): ref base A (38/30); new base T (2/2); total (40/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.89e-01 | |||||||||||
TCCGCCCGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCATCGAAGGTTGCGTGGCCAACAATA > NC_002947/1801935‑1802228 | tCCGCCCGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAg > 8:292036/1‑149 (MQ=255) ccGCCCGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAg < 3:13583/148‑1 (MQ=255) cGCCCGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAgg > 5:329923/1‑148 (MQ=255) cGCCCGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAgg < 2:217371/148‑1 (MQ=255) ggCCCGCTGCAATCGGTCATGGTGGACGACTTCATCAACCGCAATCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGAATCATCCTGTACCAGGAACAGG‑t < 2:23933/149‑1 (MQ=255) ggCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAgtt < 8:114616/149‑3 (MQ=255) gCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCA‑CCTGTTCCTGGTACAGGAtgatg > 7:271213/1‑148 (MQ=255) gCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCA‑CCTGTTCCTGGTACAGGAtgatg < 8:271213/148‑1 (MQ=255) aaTCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATg > 4:71902/1‑143 (MQ=255) gCATGGTGGACGACTTCATCAACCGCAAGCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAg < 3:9031/149‑1 (MQ=255) aTGGTGGACGACTTCATCAACCGCAAGCACGGCCGACGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAgg > 1:226268/1‑149 (MQ=255) gtggACGACTTCATCAACCGCAAGCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGAt < 5:313353/149‑1 (MQ=255) ggACGACTTCATCAACCGCAAGCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATgg > 3:119754/1‑149 (MQ=255) gacgacTTCATCAACCGCAAGCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATgg > 1:188818/1‑148 (MQ=255) catcaACCGCAAGCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGc < 8:153449/122‑1 (MQ=255) catcaACCGCAAGCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGc > 7:153449/1‑122 (MQ=255) atcaACCGCAAGCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATAc > 1:66784/1‑149 (MQ=255) atcaACCGCAAGCACGGCCG‑CGCCGAGCTGGCCTACACGCACTCCGACTACAAGTACGAAGGCCTCAAGACGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATAc > 6:349638/1‑149 (MQ=255) cGCAAGCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCACAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTtata > 2:108693/1‑142 (MQ=255) cGCAAGCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCACAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTtata < 1:108693/142‑1 (MQ=255) cAAGCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTg > 5:146690/1‑149 (MQ=255) cAAGCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTg > 3:179474/1‑149 (MQ=255) gCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCgg < 8:143543/147‑1 (MQ=255) gCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCACCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGc < 1:165193/149‑1 (MQ=255) cTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCa > 2:293696/1‑149 (MQ=255) cccGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCAt < 2:66784/147‑1 (MQ=255) cccGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCAt < 4:179959/147‑1 (MQ=255) cccGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCAt < 6:329923/147‑1 (MQ=255) cccGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATgg > 8:63897/1‑149 (MQ=255) cccGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATgg < 7:63897/149‑1 (MQ=255) cccGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATgg < 2:188818/149‑1 (MQ=255) ccGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATggg > 6:172730/1‑149 (MQ=255) ccAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGACAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGccc > 3:94187/1‑148 (MQ=255) cAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGccc > 6:169339/1‑147 (MQ=255) cAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGccc > 2:212661/1‑147 (MQ=255) cAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGa < 4:179474/149‑1 (MQ=255) cAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACACTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGa > 4:52765/1‑149 (MQ=255) tACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCGGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAgg > 7:211097/1‑148 (MQ=255) cGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGaaa < 1:293696/149‑1 (MQ=255) gAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAAt > 6:5560/1‑149 (MQ=255) ccTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGcc > 2:156114/1‑148 (MQ=255) cTCAAGCCGGTACTGGCGCCAACCTACTGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCTCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCa > 3:207611/1‑148 (MQ=255) cTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACAAGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGcc > 3:107275/1‑147 (MQ=255) aaGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATgg > 4:65587/1‑142 (MQ=255) aaGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATgg < 3:65587/142‑1 (MQ=255) ccGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAgcg > 7:200076/1‑149 (MQ=255) gTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAgg < 8:65061/130‑1 (MQ=255) gTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAgg > 7:65061/1‑130 (MQ=255) tACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCggt < 5:349638/149‑1 (MQ=255) tACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCggt < 6:146690/149‑1 (MQ=255) aCTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCggtg > 4:201816/1‑149 (MQ=255) tGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCggtggt > 3:90924/1‑149 (MQ=255) tGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGATATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAgg < 1:255247/126‑1 (MQ=255) tGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGATATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAgg > 2:255247/1‑126 (MQ=255) gcgcCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGtt < 2:266290/148‑1 (MQ=255) cgcCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTc < 5:5560/149‑1 (MQ=255) ccAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACCTGCTGCGCCGTGCCATGGGTACGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCAt < 5:239220/149‑1 (MQ=255) ccAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACAtgctg < 4:56913/90‑1 (MQ=255) ccAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACAtgctg > 3:56913/1‑90 (MQ=255) ccAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCAt < 5:172730/149‑1 (MQ=255) aCCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCATCg > 4:201247/1‑148 (MQ=255) tACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGAGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCATCGAAgg > 6:44867/1‑149 (MQ=255) cGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCATCGAAGGtt < 5:169339/149‑1 (MQ=255) tgCATCA‑CCTGTTCCTGGTACAGGATGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGa > 2:134917/2‑110 (MQ=38) tgCATCA‑CCTGTTCCTGGTACAGGATGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGa < 1:134917/109‑1 (MQ=38) catcCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGa < 4:187999/105‑1 (MQ=255) catcCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGa > 3:187999/1‑105 (MQ=255) atcCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGACAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCATCGAAGGTTGCGTGGc < 4:94187/149‑1 (MQ=255) gTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCATCGAAGGTTGCGTGGCcaac > 5:128059/1‑148 (MQ=255) aCCAGGAACAGG‑TGATGCAGATCGCCCAGGAGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCATCGAAGGTTGCGTGGCcaacaa > 1:30330/1‑148 (MQ=255) ccAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCATCGAAGGTTGCGTGGCCAACAata > 1:274421/1‑149 (MQ=255) ccAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCATCGAAGGTTGCGTGGCCAACAata > 8:318461/1‑149 (MQ=255) | TCCGCCCGGGCCCGCTGCAATCGGGCATGGTGGACGACTTCATCAACCGCAAGCACGGCCG‑CGCCGAGCTGGCCTACCCGCACTCCGACTACCAGTACGAAGGCCTCAAGCCGGTACTGGCGCCAACCTACGGCATCATCCTGTACCAGGAACAGG‑TGATGCAGATCGCCCAGGTGATGGCAGGTTATACCCTGGGTGGCGCCGACATGCTGCGCCGGGCCATGGGTAAGAAAAAGCCCGAGGAAATGGCCAAGCAGCGCGGTGGTTTCATCGAAGGTTGCGTGGCCAACAATA > NC_002947/1801935‑1802228 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |