| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,974,342 | A→G | 5.3% | N118D (AAC→GAC) | serC → | 3‑phosphoserine/phosphohydroxythreonine aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,974,342 | 0 | A | G | 5.3% | 225.1 / 2.3 | 75 | N118D (AAC→GAC) | serC | 3‑phosphoserine/phosphohydroxythreonine aminotransferase |
| Reads supporting (aligned to +/- strand): ref base A (37/34); new base G (2/2); total (39/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.05e-01 | |||||||||||
CAAGGTGCTGTTCCTGCAAGGCGGCGCCAGCCAGCAGTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTCCAACGAGACCATCGGTGGCCTGCAGTTTGACTGGGTGCCGCAAACCGGTGA > NC_002947/1974194‑1974490 | cAAGGTGCTGTTCCTGCAAGGCGGCGCCAGCCAGCAGTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGcaacgtca < 7:112374/149‑1 (MQ=255) ggTGCTGTTCCTGCAAGGCGGCGCCAGCCAGCAGTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGcaacgtcaacg > 6:59017/1‑149 (MQ=255) gTGCTGTTCCTGCAAGGCGGCGCCAGCCAGCAGTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGcaacgtcaacgt > 4:191104/1‑149 (MQ=255) tGCTGTTCCTGCAAGGCGGCGCCAGCCAGCAGTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCaacgtcaacgtc < 8:158434/149‑1 (MQ=255) ccTGCAAGGCGGCGCCAGCCAGCAGTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCa > 2:66369/1‑149 (MQ=255) tGCAAGGCGGCGCCAGCCAGCAGTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACt > 2:161841/1‑149 (MQ=255) gCAAGGCGGCGCCAGCCAGCAGTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGcaacgtcaa > 2:292916/1‑135 (MQ=255) gCAAGGCGGCGCCAGCCAGCAGTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGcaacgtcaa < 1:292916/135‑1 (MQ=255) cggcgCCAGCCAGCAGTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGc < 1:66369/149‑1 (MQ=255) gccagccaGCAGTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCAGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTa < 2:243244/149‑1 (MQ=255) ccagcAGTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGAc > 8:68161/1‑148 (MQ=255) cagcagTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTa > 6:265856/1‑149 (MQ=255) agcagTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTa < 7:287542/142‑1 (MQ=255) agcagTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTa > 8:287542/1‑142 (MQ=255) agcagTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTAc > 2:89792/1‑149 (MQ=255) cagTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCt > 1:12173/1‑149 (MQ=255) agTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTg < 1:161841/149‑1 (MQ=255) agTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTg < 6:240659/149‑1 (MQ=255) gTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTgg < 1:12462/149‑1 (MQ=255) gTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTgg < 6:223125/149‑1 (MQ=255) ttCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCGAAGCCTTCCGACTACCTGGc > 8:309272/1‑149 (MQ=255) tCGCTGAAATCCCGCTGAAACTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGCTGCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTgg < 1:263655/148‑1 (MQ=255) gCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTAc < 7:290442/135‑1 (MQ=255) tGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGCTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATcc > 7:221748/1‑149 (MQ=255) gAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTAc < 6:337780/138‑1 (MQ=255) gAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTAc > 5:337780/1‑138 (MQ=255) aaaTCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATcc < 7:52621/147‑1 (MQ=255) aaTCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCg < 2:12173/149‑1 (MQ=255) tCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGc < 7:68161/149‑1 (MQ=255) cGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGc > 3:281914/1‑146 (MQ=255) cTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGaa > 3:338929/1‑149 (MQ=255) tGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCAGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAAc > 1:91876/1‑149 (MQ=255) ccTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGGATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGTCCATCCCCGGCCAGAACGAGt < 3:91587/149‑1 (MQ=255) tgctgcCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGcaacgtcaacgt < 2:272225/94‑1 (MQ=255) tgctgcCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGcaacgtcaacgt > 1:272225/1‑94 (MQ=255) tgctgcCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGt < 2:63908/147‑1 (MQ=255) tgctgcCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGt > 1:63908/1‑147 (MQ=255) tgcCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AAc > 2:290144/1‑149 (MQ=255) tgcCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AAc > 7:112138/1‑149 (MQ=255) ccGGAAAACGGCACGGCCGACTACCTCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCCTCCCCGGCCAGAACGAGTGG‑AACCt > 8:267280/1‑149 (MQ=255) ccGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGa > 3:151602/1‑113 (MQ=255) ccGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGa < 4:151602/113‑1 (MQ=255) ccGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AAc < 3:191104/147‑1 (MQ=255) gtaaacCGGCACGGCGGACTACATCTAACCCGGCATCTGGTCTAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGAAACGTAAACGTCGCCGCCACAGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGa < 1:89792/147‑1 (MQ=255) ggAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGa < 5:59017/149‑1 (MQ=255) gAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGt > 1:245422/1‑139 (MQ=255) gAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGt < 2:245422/139‑1 (MQ=255) gcacggcCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAAc < 4:281914/149‑1 (MQ=255) cggaCGACTACATCGAAACCGTCATCTTGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCa < 8:48637/149‑1 (MQ=255) ggcCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAg > 7:3241/1‑149 (MQ=255) tACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCGTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGt > 2:313224/1‑149 (MQ=255) aTCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGACCAGAACGAGTGG‑AACCTGa < 2:104086/127‑1 (MQ=255) aTCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGACCAGAACGAGTGG‑AACCTGa < 2:108111/127‑1 (MQ=255) aTCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGACCAGAACGAGTGG‑AACCTGa > 1:108111/1‑127 (MQ=255) aTCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGACCAGAACGAGTGG‑AACCTGa > 1:104086/1‑127 (MQ=255) tCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCAc > 2:76450/1‑149 (MQ=255) gAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGACATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTACACTa > 5:306213/1‑149 (MQ=255) cGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGc > 1:154313/1‑132 (MQ=255) cGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGc < 2:154313/132‑1 (MQ=255) cGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGt > 6:127074/1‑149 (MQ=255) gCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTc > 8:31315/1‑148 (MQ=255) tGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTCCAAc > 7:109795/1‑147 (MQ=255) gTCGAAGAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAATCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGT‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTCCAACgaga < 2:91876/149‑1 (MQ=255) tCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAATCCTTACGACTACCTGGCCATCCCCGGCCATAACGAGTGGCAACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTCCAACgaga < 1:76450/149‑1 (MQ=255) tCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑aa < 3:168544/104‑1 (MQ=255) tCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑aa > 4:168544/1‑104 (MQ=255) tCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTCCAACgaga < 5:265856/148‑1 (MQ=255) tCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTCCAACGAGAc > 1:172390/1‑149 (MQ=255) ccATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTCCAACGAGACCATCGGTGGc < 4:338929/149‑1 (MQ=255) aTCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTCCAACGAGACCATCGGTGGCCt > 4:209643/1‑149 (MQ=255) aGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTCCAACGAGACCATCGGTGGCCTGCAg > 1:123786/1‑149 (MQ=255) aGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTCCAACGAGACCATCGGTGGCCTGCAg > 8:247504/1‑149 (MQ=255) cgc‑gcCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTCCAACGAGACCATCGGTGGCCTGCAGTTTGAc < 7:31315/149‑1 (MQ=255) gc‑gcCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGGCAGAACGAGTGG‑AACCTGCCCAAAAACGCAGCCGACGTGCACTATGCGTCCAACGCGACCATCGGTGGCGTGCAGTGTGCCt > 8:322566/1‑149 (MQ=255) c‑gcCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTCCAACGAGACCATCGGTGGCCTGCAGTTTGACTg > 4:152860/1‑149 (MQ=255) gcCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTCCaa < 3:285486/118‑1 (MQ=255) gcCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTCCaa > 4:285486/1‑118 (MQ=255) gcCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTCCAACGAGACCATCGGTGGCCTGCAGTTTGACTgg < 8:109795/149‑1 (MQ=255) gcCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTCCAACGAGACCATCGGTGGCCTGCAGTTTGACTgg < 3:152860/149‑1 (MQ=255) agtggcGGCGACGTTGACGTTGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTCCAACGAGACCAt > 3:18378/6‑125 (MQ=255) agtggcGGCGACGTTGACGTTGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTCCAACGAGACCAt < 4:18378/120‑1 (MQ=255) ggcGGCGACGTTGACGTTGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGt < 3:28186/68‑1 (MQ=37) ggcGGCGACGTTGACGTTGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGt > 4:28186/3‑70 (MQ=37) cgtcaacgtcGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTCCAACGAGACCATCGGTGGCCTGCAGTTTGACTGGGTGCCGCAAACCg < 8:112138/149‑1 (MQ=255) aacgtcGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTCCAACGAGACCATCGGTGGCCTGCAGTTTGACTGGGTGCCGCAAACCGGTGa < 7:247504/149‑1 (MQ=255) | CAAGGTGCTGTTCCTGCAAGGCGGCGCCAGCCAGCAGTTCGCTGAAATCCCGCTGAACCTGCTGCCGGAAAACGGCACGGCCGACTACATCGAAACCGGCATCTGGTCGAAAAAGGCCATCGAGGAAGCGC‑GCCGTTTCGGCAACGTCAACGTCGCCGCCACTGCCAAGCCTTACGACTACCTGGCCATCCCCGGCCAGAACGAGTGG‑AACCTGACCAAAAACGCAGCCTACGTGCACTATGCGTCCAACGAGACCATCGGTGGCCTGCAGTTTGACTGGGTGCCGCAAACCGGTGA > NC_002947/1974194‑1974490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |