Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 2,082,907 | G→C | 7.7% | H109Q (CAC→CAG) | PP_1861 ← | LysR family transcriptional regulator |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 2,082,907 | 0 | G | C | 7.7% | 202.2 / 7.1 | 65 | H109Q (CAC→CAG) | PP_1861 | LysR family transcriptional regulator |
Reads supporting (aligned to +/- strand): ref base G (29/31); new base C (2/3); total (31/34) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.12e-01 |
GCGGGTGTCGGCCAAGGGGCCGGCGCGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGGCGCAACTCCTCGATGATGCGCCTGGCCCGCTCGGCAAAGGCGTTGCCTGCAGGCGTGGC > NC_002947/2082760‑2083053 | gCGGGTGTCGGCCAAGGGGCCGGCGCGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGt > 6:324668/1‑149 (MQ=255) tgtCGGCCAAGGGGCCGGCGCGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTggcgg > 1:60965/1‑149 (MQ=255) cGGCCAAGGGGCCGGCGCGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTggcggcgg < 6:114181/149‑1 (MQ=255) ggCCAAGGGGCCGGCGCGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTggcggcggc < 5:80530/149‑1 (MQ=255) cAAGGGGCCGGCGCGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGCCGCCACCTggccccggc > 5:68678/1‑146 (MQ=255) cAAGGGGCCGGCGCGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGCCGCCACCTggccccggc < 6:68678/146‑1 (MQ=255) gcGGCGCGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑c < 8:325364/148‑1 (MQ=255) ccaCCTGGGCGAGGTCGACCTGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTc > 6:294451/2‑148 (MQ=255) ccAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATg > 8:28539/1‑149 (MQ=255) cAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGt < 5:104874/143‑1 (MQ=255) cAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGt > 6:104874/1‑143 (MQ=255) aGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCg < 2:60965/149‑1 (MQ=255) aCCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAAcgc < 3:131651/125‑1 (MQ=255) aCCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAAcgc > 4:131651/1‑125 (MQ=255) aCCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAg < 5:271851/149‑1 (MQ=255) aCCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGCCGCCACCTGGCCCCGGCCatt < 2:3637/122‑3 (MQ=255) aCCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGCCGCCACCTGGCCCCGGCCatt > 1:3637/1‑120 (MQ=255) gctggCCCATGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑Ca < 4:64051/124‑1 (MQ=255) ccTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACTTCCAGTCCCGGGTAGGCCAGCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAgg < 6:25698/149‑1 (MQ=255) ccTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAgg < 4:320634/149‑1 (MQ=255) gCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCAt > 5:295758/1‑149 (MQ=255) cccTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTg < 3:84773/147‑1 (MQ=255) tGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGTCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAg > 8:266527/1‑149 (MQ=255) cAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGTCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGt < 7:266527/148‑1 (MQ=255) cAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGGCCAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGt < 1:245398/149‑1 (MQ=255) cAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGt < 8:34367/148‑1 (MQ=255) cAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGt < 5:324668/148‑1 (MQ=255) gTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGaca < 7:28539/149‑1 (MQ=255) gTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGaca > 6:122315/1‑149 (MQ=255) tGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTACGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGc > 1:259567/1‑149 (MQ=255) gTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGccc > 8:67527/1‑149 (MQ=255) tCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGcc > 2:82814/1‑149 (MQ=255) aCCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGCTGCGGATCAGGCCTTCCGGGGACTTGCTCAGTGACACCGCTTCAGCCCGGGCCAgg > 7:61543/1‑149 (MQ=255) ccGCAGTTGCACGTCCAGTCCCTGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGc < 7:237564/132‑1 (MQ=255) ccGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGgc > 4:122253/1‑149 (MQ=255) ccGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGgc > 3:23212/1‑149 (MQ=255) ccGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGAGGCGGATCAGGCCTGCCGGGGCCTTGCTCAGTGACACCGc > 8:237564/1‑132 (MQ=255) cAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCAt > 7:323445/1‑113 (MQ=255) cAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCAt < 8:323445/113‑1 (MQ=255) cAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGgcgc > 5:80458/1‑148 (MQ=255) gCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGGCGCatcatc > 2:197809/1‑144 (MQ=255) gTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTcc < 7:28379/97‑1 (MQ=255) gTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTcc > 8:28379/1‑97 (MQ=255) tCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGGCGCAACTCCTCGATGATgc > 2:189775/1‑149 (MQ=255) tCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGGCGCAACTCCTCGATGATgc > 4:55883/1‑149 (MQ=255) ccGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCt < 6:64459/100‑1 (MQ=255) ccGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCt > 5:64459/1‑100 (MQ=255) ggTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGGCGCAACTCCTCGATGATGCGCCTg > 7:130502/1‑149 (MQ=255) ggTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGGCGCAACTCCTCGATGATGCGCCTg < 8:197675/149‑1 (MQ=255) tAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGGCGCAACTCCTCGATGATGCGCCTGGc < 5:122315/149‑1 (MQ=255) ccaccaGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGGCGCAACTCCTCGATGATGCGCCTGGCCCGc > 4:196921/1‑149 (MQ=255) ccaGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGGCGCAACTCCTCGATGATGCGCCTGGCCCGCTCg > 3:59980/1‑149 (MQ=255) aGT‑CGGCAAGGGCCGGGGCCAGGGGGCGGCGGCAAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTCACACCGCTTCAGCCCGGGCCAGGCGCAACTCCTCGATGATGCGCCTGGCCCGCTCGGCAAAg < 8:130502/149‑1 (MQ=255) gT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGGCGCAACTCCTCGATGATGCGCCTGGCCCGCTCGGCAAAgg > 3:106444/1‑149 (MQ=255) gcggttGGCCGCCGCCACCTGGCCCCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGGCGCAACTCCTCGATGATGCGCCTGGCCCGCTCGGCAAAGGc < 6:263621/142‑1 (MQ=255) gCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGGCGCAACTCCTCGATGATGCGCCTGGCCCGCTCGGCAAAGGCGtt < 7:67527/149‑1 (MQ=255) aTGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGGCGCAACTCCTCGATGATGCGCCTGGCCCGCTCGGCAAAGGCGTTGcc < 4:106444/149‑1 (MQ=255) aTGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGGCGCAACTCCTCGATGATGCGCCTGGCCCGCTCGGCAAAGGCGNTGcc < 5:294451/149‑1 (MQ=255) ggCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGGCGCAACTCCTCGATGATGCGCCTGGCCCGCTCGGCAAAGGCGTTGCCTg > 5:235561/1‑149 (MQ=255) ggCCGGGGCCAGGTGGAGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGGCGCCACTCCTCGATGATGCGCCTGGCCCGCTCGGCAAAGGCGTTGCCTg > 6:67591/1‑149 (MQ=255) gggCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGGCGCAACTCCTCGATGATGCGCCTGGCCCGCTCGGCAAAGGCGTTGCCTGCAGGc < 1:82814/149‑1 (MQ=255) ccAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGCTCAGGCCATCCGGGGCATTGCTCAGTGACACCGCGTCAGCCCGGGCCAGGCGCAACTCCTCGATGATGCGCCTGGCCCGCTCGGCAAAGGCGTTGCCTGCAGGCGTg < 8:61543/149‑1 (MQ=255) ccAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGGCGCAACTCCTCGATGATGCGCCTGGCCCGCTCGGCAAAGGCGTTGCCTGCAGGCGTg < 6:80458/149‑1 (MQ=255) ccAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGGCGCAACTCCTCGATGATGCGCCTGGCCCGCTCGGCAAAGGCGTTGCCTGCAGGCGTg < 4:59980/149‑1 (MQ=255) aGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGGCGCAACTCCTCGATGATGCGCCTGGCCCGCTCGGCAAAGGCGTTGCCTGCAGGCGTGGc < 1:189775/149‑1 (MQ=255) | GCGGGTGTCGGCCAAGGGGCCGGCGCGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGT‑CGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGG‑CAGGGGCGTCGATGCGGATCAGGCCTTCCGGGGCATTGCTCAGTGACACCGCTTCAGCCCGGGCCAGGCGCAACTCCTCGATGATGCGCCTGGCCCGCTCGGCAAAGGCGTTGCCTGCAGGCGTGGC > NC_002947/2082760‑2083053 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |