| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,344,669 | C→A | 6.7% | intergenic (‑20/+55) | PP_2061 ← / ← PP_2062 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,344,669 | 0 | C | A | 6.7% | 224.8 / 4.3 | 73 | intergenic (‑20/+55) | PP_2061/PP_2062 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (32/36); new base A (3/2); total (35/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.20e-01 | |||||||||||
TGATAGTGTCCGGACCAGTCGTCGACAATAAATACCCCGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGT > NC_002947/2344525‑2344817 | tGATAGTGTCCGGACCAGTCGTCGACAATAAATACCCCGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCg > 2:227912/1‑147 (MQ=255)tGATAGTGTCCGGACCAGTCGTCGACAATAAATACCCCGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCg > 2:150622/1‑147 (MQ=255) gATAGTGTCCGGACCAGTCGTCGACAATAAATACCCCGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGAGCCg > 6:168840/1‑146 (MQ=255) gATAGTGTCCGGACCAGTCGTCGACAATAAATACCCCGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACCTTATTGCGGGCATTGAAATTGCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCg > 2:110084/1‑146 (MQ=255) aTAGTGTCCGGCCCAGTCGTCGACAATAAATACCCCGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTAGACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAga > 3:200355/1‑149 (MQ=255) aTAGTGTCCGGACCAGTCGTCGACAATAAATACCCCGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGTTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAga > 5:145855/1‑149 (MQ=255) tAGTGTCCGGACCAGTCGTCGACAATAAATACCCCGTT‑CTAATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAAATCAACATTTCAGCGCAGCTGGCGTGAGTATTCAAGAGGGAGACAGTAGAGGCGCCGAAgac > 6:211011/1‑149 (MQ=255) gtgtCCGGACCAGTCGTCGACAATAAATACCCCGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAgacg < 4:232070/148‑1 (MQ=255) tCCGGACCAGTCGTCGACAATAAATACCCCGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAgacgac > 7:265332/1‑147 (MQ=255) cGGACCAGTCGTCGACAATAAATACCCCGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAgg < 5:228344/149‑1 (MQ=255) cGGACCAGTCGTCGACAATAAATACCCCGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAgg > 4:43385/1‑149 (MQ=255) ggACCAGTGGTCGACAATAAATCACCCGTT‑CTCATAGGCGATATAACCCGAAGCGCTACCGTTATTGCTGGCATTTAAATTCCACTTTTCAGCGCCGCTGGGGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAggg < 4:166537/149‑1 (MQ=255) ggACCAGTCGTCGACAATAAATACCCCGTTCCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAgg > 1:31224/1‑149 (MQ=255) gACCAGTCGTCGACAATAAATACCCCGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGt > 5:6496/1‑149 (MQ=255) aCCAGTCGTCGACAATAAATACCCCGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTc < 1:26624/149‑1 (MQ=255) tcgtcgACAATAAATACCCCGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCTGTAGAGGCGCCGAAGACGACCAGGGTCGT‑Ttc < 1:40279/149‑1 (MQ=255) tcgtcgACAATAAATACCCCGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑Ttc > 4:221459/1‑149 (MQ=255) tcgtcgACAATAAATACCCCGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑Ttc < 1:217949/149‑1 (MQ=255) tcgACAATAAATACCCCGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑Ttcgtc > 7:192951/1‑149 (MQ=255) tcgACAATAAATACCCCGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑Ttcgtc < 4:262958/149‑1 (MQ=255) gACAATAAATACCCCGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGc < 3:43385/149‑1 (MQ=255) ccccGTT‑CTCATAGGCGTTATATCCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAATAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTAt < 4:254633/148‑1 (MQ=255) cccGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGa < 1:150622/149‑1 (MQ=255) ccGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAg < 4:14857/149‑1 (MQ=255) cGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAgt < 6:145855/149‑1 (MQ=255) cGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAgt < 6:58262/149‑1 (MQ=255) cGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAgt < 3:642/149‑1 (MQ=255) cGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAgt < 7:256466/149‑1 (MQ=255) cGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGACGAA‑ACGACCCTGGTCGtct < 5:337026/128‑3 (MQ=255) cGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGACGAA‑ACGACCCTGGTCGtct > 6:337026/1‑126 (MQ=255) ctcATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAgtgtg > 8:5655/1‑148 (MQ=255) tAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTAttt < 6:6496/149‑1 (MQ=255) tAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTAttt > 1:159874/1‑149 (MQ=255) ggCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTg > 1:190645/1‑148 (MQ=255) ggCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGt < 2:31224/149‑1 (MQ=255) gATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAgtgt < 4:209690/138‑1 (MQ=255) gATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAgtgt > 3:209690/1‑138 (MQ=255) ataACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCa > 6:264951/1‑149 (MQ=255) taACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCa < 3:221459/148‑1 (MQ=255) aaCCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGt > 1:142840/1‑149 (MQ=255) cAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGGCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATggg < 4:200355/149‑1 (MQ=255) aGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGc < 2:159874/149‑1 (MQ=255) aTTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTAttgtt > 2:280081/1‑149 (MQ=255) aaTTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGTGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCg < 5:168840/148‑1 (MQ=255) aaTTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGt < 2:190645/149‑1 (MQ=255) aTTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTGGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGtt < 1:227912/149‑1 (MQ=255) ttCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGtt > 2:25393/1‑148 (MQ=255) ccACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGa > 7:176003/1‑148 (MQ=255) cacaTTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTAt < 4:6185/89‑1 (MQ=255) cacaTTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGat > 8:251908/1‑148 (MQ=255) aTTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTTGTTGataata > 3:139059/1‑149 (MQ=255) aTTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGataata > 8:255576/1‑149 (MQ=255) tttCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGATAatat < 8:176003/149‑1 (MQ=255) aGCGCCGCTGGCGTGAGTATTCAAGAGGGAGTCATTATAGGTGACGTAGACGACCATGGTCGT‑TTGTTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGATAATATTGAt < 5:264951/149‑1 (MQ=255) gcgcCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTCGCGCTATTGTTGTCGTTGATAATATTGAt < 1:25393/149‑1 (MQ=255) cgccgcTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGataa < 6:203437/140‑1 (MQ=255) cgccgcTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGataa > 5:203437/1‑140 (MQ=255) cgccgcTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGATAATATTGATGt < 7:251908/149‑1 (MQ=255) gCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGATAATATTGATGTCTACGa < 7:5655/147‑1 (MQ=255) gCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATg > 3:178189/1‑149 (MQ=255) gCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATg < 2:142840/149‑1 (MQ=255) gTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGcc > 4:78785/1‑149 (MQ=255) tATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGc > 1:203320/1‑149 (MQ=255) aTTCAAGAGGGCTTCATTAGAGTCTCCGAATACGACCTGGGTGGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGc < 5:211011/148‑1 (MQ=255) gagGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGATGATTTTTTT‑TCGCTATTGTTGTCGTTGATAATATTGATGTATACTATTCCCTTGCTTATaaa > 4:307994/1‑149 (MQ=255) ggCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCt > 2:22161/1‑149 (MQ=255) gTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCtttt < 4:143718/149‑1 (MQ=255) tCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTg < 3:78785/149‑1 (MQ=255) cAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGata < 6:7986/109‑1 (MQ=255) cAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGata > 5:7986/1‑109 (MQ=255) gTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTTGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCa < 4:139059/149‑1 (MQ=255) agGCGACGAA‑ACGACCCTGGTCGTCTTCGGCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCt > 4:87648/1‑149 (MQ=38) agGCGACGAA‑ACGACCCTGGTCGTCTTCGGCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCt > 2:52430/1‑149 (MQ=38) cgcCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGa < 8:265332/149‑1 (MQ=255) ccGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGt > 8:291158/1‑149 (MQ=255) | TGATAGTGTCCGGACCAGTCGTCGACAATAAATACCCCGTT‑CTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTT‑GCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGT > NC_002947/2344525‑2344817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |