| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 289,942 | C→A | 8.2% | intergenic (+26/‑140) | oprE → / → PP_0235 | outer‑membrane porin E/peroxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 289,942 | 0 | C | A | 8.2% | 216.9 / 8.5 | 73 | intergenic (+26/‑140) | oprE/PP_0235 | outer‑membrane porin E/peroxidase |
| Reads supporting (aligned to +/- strand): ref base C (32/35); new base A (4/2); total (36/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.58e-01 | |||||||||||
GAAGGCACTCTCAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCATGAGCCTC > NC_002947/289794‑290090 | gAAGGCACTCTCAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGCCCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGcc > 8:81358/1‑149 (MQ=255)gAAGGCACTCTCAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGcc < 6:196067/149‑1 (MQ=255)gAAGGCACTCTCAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGcc > 6:272291/1‑149 (MQ=255) gCACTCTCAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGAt > 6:124487/1‑149 (MQ=255) aCTCTCAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGc > 6:324116/1‑149 (MQ=255) tcAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCTCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCt < 4:282892/140‑1 (MQ=255) tcAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCTCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCt > 3:282892/1‑140 (MQ=255) tcAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGACCTGTACATAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGa < 8:39568/147‑1 (MQ=255) ggCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCtttt < 4:112174/149‑1 (MQ=255) ccTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCtttttt < 8:189313/149‑1 (MQ=255) cTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTtg > 3:201658/1‑149 (MQ=255) ggCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCtttt < 2:134191/143‑1 (MQ=255) ggCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCtttt > 1:134191/1‑143 (MQ=255) ggCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGc > 2:15727/1‑149 (MQ=255) ttCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTg > 1:266245/1‑149 (MQ=255) gCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGa < 2:210465/149‑1 (MQ=255) tGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGAtt > 5:1999/1‑148 (MQ=255) cGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTTGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGAttt < 4:186236/147‑1 (MQ=255) cGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTta > 4:27717/1‑148 (MQ=255) gTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCttttt > 5:239931/1‑131 (MQ=255) gTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCttttt < 6:239931/131‑1 (MQ=255) aaGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGc > 2:340736/1‑118 (MQ=255) aaGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGc < 1:340736/118‑1 (MQ=255) gtgtCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTtgt > 8:16352/1‑128 (MQ=255) gtgtCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTtgt < 7:16352/128‑1 (MQ=255) tACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGc > 4:264743/1‑110 (MQ=255) tACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGc < 3:264743/110‑1 (MQ=255) tACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAAAAGCCTCGCATCAGGCGAGGCttctttttcag > 5:227585/1‑121 (MQ=38) tACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAAAAGCCTCGCATCAGGCGAGGCttctttttcag < 6:227585/126‑6 (MQ=38) aCCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGt > 8:187425/1‑148 (MQ=255) ccGTGGTAGAGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGtt < 5:282545/148‑1 (MQ=255) cGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGCATTTTGGTtat < 6:1999/149‑1 (MQ=255) gTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTataa‑a < 1:15727/148‑1 (MQ=255) cggcgAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATaa‑ataaat < 1:16251/149‑1 (MQ=255) gcgAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTg > 6:120093/1‑149 (MQ=255) gAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGtt < 3:166669/149‑1 (MQ=255) aaGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGttat < 7:187425/149‑1 (MQ=255) ccTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTc > 1:90045/1‑149 (MQ=255) taCAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAATCCTTAGCTGAAAAAGAAGCCTCGCCTGATGCGATGCTTTTTTTTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCttt < 1:91169/147‑1 (MQ=255) gACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCttt < 5:272291/148‑1 (MQ=255) aCAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCtttt < 2:90045/148‑1 (MQ=255) cAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCATGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTg > 4:197817/1‑149 (MQ=255) aaaGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGt < 2:266245/149‑1 (MQ=255) aGACCAGACTCGCTTCATCGTCAACTACACTTACAACTTCCTGTAATCCTTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCATATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGttt < 3:229411/149‑1 (MQ=255) aGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAAt < 5:124487/149‑1 (MQ=255) tCGGTTCATCGTGAACTACACGTACAACTTGCTGTAAGCCGGAGCTGAAAAAGAAGCCTCGCCGGATGGGAGGCGTTTTTGTGGCTGCAGATTTTTATGTTTTTTTGTTTTTA‑ATTAATTGTTTTTTTTTGTTTTTGTTTTTTATGGAt > 8:134258/1‑149 (MQ=255) tCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGAt > 1:232051/1‑149 (MQ=255) tCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTACAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCttttt < 5:27405/131‑1 (MQ=255) tCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTACAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCttttt > 6:27405/1‑131 (MQ=255) cATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCa < 2:244054/147‑1 (MQ=255) gTGAAGTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGAAGGcaca > 4:156561/1‑149 (MQ=255) cTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGttatt > 6:286532/1‑111 (MQ=255) cTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGttatt < 5:286532/111‑1 (MQ=255) ttACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATa < 7:134258/149‑1 (MQ=255) aCAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACg > 2:237395/1‑149 (MQ=255) cTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTAc < 5:120093/149‑1 (MQ=255) cTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGaa < 3:27717/149‑1 (MQ=255) tGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAAc > 5:69141/1‑149 (MQ=255) tAAGCCTTAGCTTAAAAAGAAGCCTCTCCTGATGCGATGCTTTTTTTTGACTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCGGGCACATTGAACCCATACGGTACAGAccc < 3:201039/148‑1 (MQ=255) ccGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAAcccagcc < 4:222948/149‑1 (MQ=255) aggcacaaaaaaGCCTCGCATCAGGCGAGGCTTCTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGa > 4:253989/7‑149 (MQ=38) ttaaaaaCAATCCTCGCCTGATGCGAGGCTTTTTTGTTCCTGCAGATTTATATGTATTTTGGATATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGc < 8:272270/147‑1 (MQ=255) tGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAGTCGATTG‑‑GGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCg > 7:180621/1‑149 (MQ=255) tGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGc > 8:185122/1‑149 (MQ=255) tGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGc > 5:287822/1‑149 (MQ=255) aaaaaGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGc < 6:69141/147‑1 (MQ=255) aagaagCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACa > 7:134745/1‑127 (MQ=255) aagaagCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACa < 8:134745/127‑1 (MQ=255) gaagCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGcc > 7:246344/1‑149 (MQ=255) aagCCTCGCATCAGGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTGTTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAAcc < 6:71486/129‑1 (MQ=255) aagCCTCGCATCAGGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTGTTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAAcc > 5:71486/1‑129 (MQ=255) aagCCTCGCATCAGGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGcc > 4:308802/1‑148 (MQ=255) ccTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATc < 4:310258/90‑1 (MQ=255) ccTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATc > 3:310258/1‑90 (MQ=255) cGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCATGAGc > 7:253843/1‑149 (MQ=255) gCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCATGAGcc > 2:47852/1‑149 (MQ=255) ccTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAAGTGTTATTTATTCTTTTTGTTTTTAATAGATTGCAGGCACATTGAACGCATAAGGTAGAGAACCCAGCCGAGGCGCCGCCGCCCATGAGcgt > 8:132992/1‑147 (MQ=255) cTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAGATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCATGAGCCt > 1:258579/1‑149 (MQ=255) cTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCATGAGCCTc < 6:287822/149‑1 (MQ=255) | GAAGGCACTCTCAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAA‑ATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCATGAGCCTC > NC_002947/289794‑290090 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |