| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 293,197 | A→T | 6.8% | D185V (GAC→GTC) | ssuD → | alkanesulfonate monooxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 293,197 | 0 | A | T | 6.8% | 248.9 / 7.4 | 88 | D185V (GAC→GTC) | ssuD | alkanesulfonate monooxygenase |
| Reads supporting (aligned to +/- strand): ref base A (42/40); new base T (2/4); total (44/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.53e-01 | |||||||||||
CCCGTATCTGGCGCAAGGTGCTGGAAGGCGAAAACGTCGATTACGACGGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTACGCTTCGGTATCCGCCTGCACGTGATCGTGC > NC_002947/293050‑293340 | cccGTATCTGGCGCAAGGTGCTGGAAGGCGAAAACGTCGATTACGACGGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGAc < 4:78074/149‑1 (MQ=255) ccGTATCTGGCGCAAGGTGCTGGAAGGCGAAAACGTCGATTACGACGGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGAcc > 5:222244/1‑149 (MQ=255) tGGCGCAAGGTGCTGGAAGGCGAAAACGTCGATTACGACGGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCG‑CCAGGTCCT‑gggcggc > 4:18752/1‑144 (MQ=255) ggCGCAAGGTGCTGGAAGGCGAAAACGTCGATTACGACGGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGcc > 2:37281/1‑149 (MQ=255) ggCGCAAGGTGCTGGAAGGCGAAAACGTCGATTACGACGGTAAGAACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGACGCCGCCCAGGACCT‑GGCGGcc > 3:327922/1‑149 (MQ=255) gcgcAAGGTGCTGGAAGGCGAAAACGTCGATTACGACGGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCG‑CCAGGTCCTGGGCGGcct < 1:204189/149‑2 (MQ=255) gcgcAAGGTGCTGGAAGGCGAAAACGTCGATTACGACGGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCG‑CCAGGTCCTGGGCGGcct < 3:18752/149‑2 (MQ=255) cgcAAGGTGCTGGAAGGCGAAAACGTCGATTACGACGGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCG‑CCAGGTCCTGGGCGGcctc < 7:29214/149‑3 (MQ=255) gcAAGGTGCTGGAAGGCGAAAACGTCGATTACGACGGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGcc > 7:35061/1‑146 (MQ=255) gcAAGGTGCTGGAAGGCGAAAACGTCGATTACGACGGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGcc < 8:35061/146‑1 (MQ=255) cAAGGTGCTGGAAGGCGAAAACGTCGATTACGACGGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCACGACCG‑GGCGGCCgca > 6:228771/1‑146 (MQ=255) ggTGCTGGAAGGCGAAAACGTCGATTACGACGGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAgg < 5:228771/149‑1 (MQ=255) tGGAAGGCGAAAACGTCGATTACGACGGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAg > 2:245371/1‑149 (MQ=255) gAAGGCGAAAACGTCGATTACGACGGTAAGCACATCCAGGTAAAGGGCTCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAg < 2:192209/147‑1 (MQ=255) gCGAAAACGTCGATTACGACGGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCCCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTac > 6:280478/1‑149 (MQ=255) aaaaCGTCGATTACGACGGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTacct > 5:243695/1‑148 (MQ=255) gATTACGACGGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTgggg < 3:280676/149‑1 (MQ=255) acgacgGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGa < 1:151651/148‑1 (MQ=255) acgacgGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGa < 2:67569/148‑1 (MQ=255) cgacgGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGc < 3:232356/149‑1 (MQ=255) gacgGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTacct < 7:88194/134‑1 (MQ=255) gacgGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTacct > 8:88194/1‑134 (MQ=255) gTAAGCACATCGAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGATCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCg < 2:249149/149‑1 (MQ=255) tAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCgg > 2:346245/1‑149 (MQ=255) ggTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGcc > 2:140923/1‑148 (MQ=255) gTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCga < 1:257130/149‑1 (MQ=255) aaaGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGc < 7:194437/135‑1 (MQ=255) aaaGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGc > 8:194437/1‑135 (MQ=255) aaaGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCgag > 3:141578/1‑148 (MQ=255) aGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCgag > 2:126389/1‑146 (MQ=255) gcgcCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATc < 2:288833/149‑1 (MQ=255) cgcCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTggg < 1:217525/116‑1 (MQ=255) cgcCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTggg > 2:217525/1‑116 (MQ=255) ccAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGca > 7:185207/1‑149 (MQ=255) ccAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGca < 5:280478/149‑1 (MQ=255) cAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCgg > 8:213226/1‑125 (MQ=255) cAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCgg < 7:213226/125‑1 (MQ=255) ctctACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGt < 4:327922/146‑1 (MQ=255) ctctACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTgc‑g > 5:70484/1‑149 (MQ=255) ctACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGc > 6:84720/1‑126 (MQ=255) tACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTgc‑gc < 4:141578/147‑1 (MQ=255) tACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTgc‑gc < 7:123219/147‑1 (MQ=255) cccACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGt < 7:60394/141‑1 (MQ=255) cccACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGt > 8:60394/1‑141 (MQ=255) ccACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCgag < 8:221351/126‑1 (MQ=255) ccACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGaaaa < 1:37281/149‑1 (MQ=255) ccACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGaaa > 4:192466/1‑148 (MQ=255) ccACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGaaa > 8:220238/1‑148 (MQ=255) ccACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGaaa > 7:172622/1‑148 (MQ=255) acACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTAGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCgag > 7:221351/2‑126 (MQ=255) aCCGTTTCAGCAAGCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTTACCTGGGGCGAGCCACCGGCAGCTg < 2:249885/116‑1 (MQ=255) aCCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCAAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTg > 1:249885/1‑116 (MQ=255) ccGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGc < 1:346245/149‑1 (MQ=255) ccGATTCAGCAACCACGCCCACCGCTGTATTTAGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGc < 6:243695/149‑1 (MQ=255) cAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGACCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGgctgc > 5:43966/1‑149 (MQ=255) aGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGgctgct > 7:222259/1‑149 (MQ=255) gtaaCCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTc < 1:141405/147‑1 (MQ=255) aaCCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTc > 1:331867/1‑147 (MQ=255) aCCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAg < 2:62584/149‑1 (MQ=255) ccACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAgg > 6:295048/1‑149 (MQ=255) ccACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAgg < 6:70484/149‑1 (MQ=255) ccACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGcgcg > 1:329485/1‑148 (MQ=255) cACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGaa < 8:172622/149‑1 (MQ=255) cGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTa > 8:73419/1‑149 (MQ=255) tGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCAc < 4:302553/81‑1 (MQ=255) tGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCAc > 3:302553/1‑81 (MQ=255) aTTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCga > 4:267877/1‑94 (MQ=255) aTTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTACGCTTc > 6:166704/1‑149 (MQ=255) tttCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTACGCTTCg < 1:140923/149‑1 (MQ=255) tttCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTACGCTTCg > 5:288540/1‑149 (MQ=255) tttCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTACGCTTCg < 6:288540/149‑1 (MQ=255) cggcTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTACGCTTCGGTATcc < 1:126389/149‑1 (MQ=255) cggcTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTACGCTTCGGTATcc < 1:223813/149‑1 (MQ=255) ggcTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGCTGCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTACGCTTCGGTATcc < 1:245371/149‑1 (MQ=255) cTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTACGCTTCGGTATCCGcc > 3:268147/1‑149 (MQ=255) gTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTACGCTTCGGTATCCGCCTg > 7:10578/1‑148 (MQ=255) gTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTACGCTTCGGTATCCGCCTGc < 3:192466/149‑1 (MQ=255) tCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTACGCTTCGGTATCCGCCTGCa > 5:326701/1‑149 (MQ=255) cGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTACGCTTCGGTATCCGCCTGCACg > 8:157347/1‑149 (MQ=255) gAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTACGCTTCGGTATCCGCCTGCACGt > 3:326873/1‑149 (MQ=255) ggCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTACGCTTCGGTATCCGCCTGCACGTGa < 8:10578/149‑1 (MQ=255) gccgccCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTACGCTTCg > 8:185894/1‑130 (MQ=255) gccgccCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTACGCTTCg < 7:185894/130‑1 (MQ=255) gccgccAGGTCCTGGGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGaa > 3:4488/5‑120 (MQ=255) gccgccAGGTCCTGGGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGaa < 4:4488/116‑1 (MQ=255) ccgccCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTACGCTTCGGTATCCGCCTGCACGTGATc < 8:222259/149‑1 (MQ=255) gccCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTACGCTTCGGTATCCGCCTGCACGTGATCGt > 4:46265/1‑149 (MQ=255) ccAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTACGCTTCGGTATCCGCCTGCACGTGATCGTGc < 5:295048/149‑1 (MQ=255) | CCCGTATCTGGCGCAAGGTGCTGGAAGGCGAAAACGTCGATTACGACGGTAAGCACATCCAGGTAAAGGGCGCCAAGCTGCTCTACCCACCGATTCAGCAACCACGCCCACCGCTGTATTTCGGCGGCTCGTCCGAGGCCGCCCAGGACCT‑GGCGGCCGAACAGGTCGAGCTGTACCTGACCTGGGGCGAGCCACCGGCAGCTGTTGCCGAGAAGATCGCACAGGTGC‑GCGAAAAAGCGGCTGCTCAAGGGCGCGAAGTACGCTTCGGTATCCGCCTGCACGTGATCGTGC > NC_002947/293050‑293340 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |