| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 298,120 | C→G | 5.6% | intergenic (‑117/+37) | gshA ← / ← PP_0244 | glutamate‑‑cysteine ligase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 298,120 | 0 | C | G | 5.6% | 229.5 / 3.5 | 71 | intergenic (‑117/+37) | gshA/PP_0244 | glutamate‑‑cysteine ligase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (35/32); new base G (2/2); total (37/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.53e-01 | |||||||||||
GCTCAGGCGGCGGTTGAGGAGTTCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGCAC > NC_002947/297974‑298268 | gCTCAGGCGGCGGTTGAGGAGTTCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAgcg > 5:60748/1‑148 (MQ=255) tCAGGCGGCGGTTGAGGAGTTCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCAc > 8:104740/1‑149 (MQ=255) aGGCGGCGGTTGAGGAGTTCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCActg < 4:210379/149‑1 (MQ=255) gcggcgGTTGAGGAGTTCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCActgct < 1:261556/149‑1 (MQ=255) gcggTTGAGGAGTTCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGaa < 5:17011/149‑1 (MQ=255) ggTTGAGGAGTTCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGaaaa < 4:133198/149‑1 (MQ=255) ttCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCGCTGGCActgct < 7:20000/134‑1 (MQ=255) ttCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCGCTGGCActgct > 8:20000/1‑134 (MQ=255) ttCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGa > 4:31051/1‑148 (MQ=255) ttCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGa > 7:272963/1‑148 (MQ=255) ttCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGa > 8:166149/1‑148 (MQ=255) cGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATAc > 2:108711/1‑149 (MQ=255) aaGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCtt > 7:194091/1‑149 (MQ=255) aGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGCGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTg < 6:60748/149‑1 (MQ=255) gATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTgg > 2:295498/1‑149 (MQ=255) ttCCTTCATGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCt < 5:269342/149‑1 (MQ=255) cTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTa > 2:286715/1‑147 (MQ=255) cTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTa > 6:63737/1‑147 (MQ=255) ttCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCa < 3:257396/127‑1 (MQ=255) ttCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCa > 4:257396/1‑127 (MQ=255) ttCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTa > 8:207284/1‑146 (MQ=255) cgcgTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAAcc < 7:258959/149‑1 (MQ=255) tCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGa < 7:104740/149‑1 (MQ=255) aGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAg < 5:63737/149‑1 (MQ=255) aGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAg < 1:286715/149‑1 (MQ=255) ccccAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGaa < 8:204332/143‑1 (MQ=255) ccccAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGaa > 7:204332/1‑143 (MQ=255) cccAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCt > 7:140616/1‑149 (MQ=255) tatGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTACCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTgcgc < 1:108711/149‑1 (MQ=255) tatGGGGGTAGAGATAACGGGCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTgcgc < 4:810/149‑1 (MQ=255) gggggTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAgg > 6:311004/1‑136 (MQ=255) gggggTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAgg < 5:311004/136‑1 (MQ=255) gggTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTg < 1:295498/148‑1 (MQ=255) gagaTAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGccacc < 2:243819/149‑1 (MQ=255) agaTAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGccacca < 8:272963/149‑1 (MQ=255) agaTAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGccac > 1:310915/1‑147 (MQ=255) aCGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTagag < 5:238551/112‑1 (MQ=255) aCGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTagag > 6:238551/1‑112 (MQ=255) gTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCg < 7:207284/149‑1 (MQ=255) tCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTT‑CAGCAGTGCGCTGGCACTGCTGgaa < 2:121958/77‑1 (MQ=25) tCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTT‑CAGCAGTGCGCTGGCACTGCTGgaa > 1:121958/1‑77 (MQ=25) aCAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCt > 5:298541/1‑149 (MQ=255) cAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGccc < 8:140616/147‑1 (MQ=255) cAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCt < 3:31051/148‑1 (MQ=255) tAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTAc > 2:345311/1‑149 (MQ=255) tAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACAGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTAc > 7:51689/1‑149 (MQ=255) ggAAGAAAGGAACTAGAGTTGTCTCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACAGCAGATACTGCTTGGTGAGCTAGAGAAACGCGAAGGTTCCTAGCGCTTTGGACACCAGCTTGTCGCCCTGCACTActa > 2:27681/1‑147 (MQ=255) aGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTc > 2:139407/1‑149 (MQ=255) aGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTCGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGCCgggcgg > 1:110523/1‑145 (MQ=255) gAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGt < 6:235223/146‑1 (MQ=255) gAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGt > 5:235223/1‑146 (MQ=255) cTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGacca < 8:194091/149‑1 (MQ=255) gCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGaccac > 3:126750/1‑147 (MQ=255) gTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAgg > 5:245662/1‑149 (MQ=255) tGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGt > 6:75407/1‑149 (MQ=255) cGCCTGGTCTACGCGCTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTgcg < 8:51689/149‑1 (MQ=255) gCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTc > 7:89467/1‑87 (MQ=255) gCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTc < 8:89467/87‑1 (MQ=255) gCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGACCTGCACTACGTCGGCGTCGACCACCAGGGTgcgc > 8:94219/1‑149 (MQ=255) gCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACAAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTgcgc > 8:94221/1‑149 (MQ=255) cTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGcgccg > 7:247502/1‑149 (MQ=255) ggTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCgccgcc > 5:80525/1‑149 (MQ=255) gTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGccc > 3:161625/1‑149 (MQ=255) gcgGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTg > 3:149822/1‑149 (MQ=255) cgGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTgc < 2:310915/149‑1 (MQ=255) ggTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTg > 7:166067/1‑147 (MQ=255) gTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTgcag < 6:298541/149‑1 (MQ=255) ttCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTgcagc < 6:245662/149‑1 (MQ=255) ccAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTgcagca < 1:345311/148‑1 (MQ=255) agTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAg < 4:126750/149‑1 (MQ=255) ccAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGt < 8:247502/149‑1 (MQ=255) cAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTg > 4:77951/1‑149 (MQ=255) cgcACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGcac < 7:166149/149‑1 (MQ=255) | GCTCAGGCGGCGGTTGAGGAGTTCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGCAC > NC_002947/297974‑298268 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |