| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,911,782:1 | +T | 6.6% | coding (399/477 nt) | ccmH ← | cytochrome c heme lyase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,911,782 | 1 | . | T | 6.6% | 306.8 / 14.8 | 76 | coding (399/477 nt) | ccmH | cytochrome c heme lyase subunit |
| Reads supporting (aligned to +/- strand): ref base . (37/34); new base T (3/2); total (40/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.76e-01 | |||||||||||
AGCAGCAAAAAGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCATAGCGGTCGAC > NC_002947/4911650‑4911925 | agcagcAAAAAGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGgc < 1:354477/149‑1 (MQ=255) caAAAAGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAANCNTGGGTCTGTTCNTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCgg > 5:74455/1‑149 (MQ=255) aaaaGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGcc > 7:312054/1‑132 (MQ=255) aaaaGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGcc < 8:312054/132‑1 (MQ=255) aaGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTa < 5:333305/149‑1 (MQ=255) gCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCTCCCTGC‑ACGGCCGTAGCACGGAGCCGGCGTAc > 2:30265/1‑148 (MQ=255) cTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCGTGCTACGGCCGT‑GCAGGGCGCCga < 6:213323/142‑2 (MQ=255) cTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCGTGCTACGGCCGT‑GCAGGGCGCCga > 5:213323/1‑141 (MQ=255) cTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGa > 6:273672/1‑149 (MQ=255) ggCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCAcc > 3:356913/1‑149 (MQ=255) gAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGc > 7:140410/1‑149 (MQ=255) gcagAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGcaccac > 4:351476/1‑149 (MQ=255) gAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACg > 4:173003/1‑147 (MQ=255) gAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGaa < 8:140410/149‑1 (MQ=255) gAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGaa < 3:351476/149‑1 (MQ=255) gAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGaa < 5:273672/149‑1 (MQ=255) cccGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCCCCGCCAGCACCACGAAGCCaa > 8:92091/1‑148 (MQ=255) cccGCGCTAAGCCAGAATTCAATCATAGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGaa < 2:52569/144‑1 (MQ=255) cccGCGCTAAGCCAGAATTCAATCATAGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGaa > 1:52569/1‑144 (MQ=255) ccGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCAcc > 6:388291/1‑149 (MQ=255) gcgcTAAGCCTGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑AGGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCgg < 1:30265/149‑1 (MQ=255) gCCACAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCaa > 6:77857/1‑149 (MQ=255) aGAATTCAATCATGGGGCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGAt < 5:387797/149‑1 (MQ=255) aTTCAATCATGGGTATGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATccc < 5:309364/149‑1 (MQ=255) ttCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGT‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACAAAGCCACCGGCCAGCAAGATcccc > 3:220526/1‑149 (MQ=255) ttCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCa > 2:22632/1‑138 (MQ=255) ttCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCa < 1:22632/138‑1 (MQ=255) aaTCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCgg < 5:388291/148‑1 (MQ=255) aaTCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTAAGATCACCGCCAGCACCACCAAGCCACCGGCCAGCAAGATCCCCggc > 5:137488/1‑148 (MQ=255) tCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGc > 5:403832/1‑148 (MQ=255) tCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGc > 1:43339/1‑148 (MQ=255) ttCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACcaca < 6:403832/146‑1 (MQ=255) ttCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCAcagca > 1:203464/1‑149 (MQ=255) ttCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCAcag > 1:138235/1‑147 (MQ=255) cTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACagcagc > 7:312664/1‑149 (MQ=255) tttttCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACagcagc > 1:221580/1‑148 (MQ=255) tttCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCAcagc > 2:199008/1‑143 (MQ=255) tttCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCAcagc < 1:199008/143‑1 (MQ=255) ttCCATCAGTTTGGAGAGACGNTCGCGTTATTCGTCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAATCCACCGGCCATCAAGATCCNCGGGCCAAACCACAGCAGCCAg < 6:74455/148‑1 (MQ=255) tCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAgg > 4:163674/1‑148 (MQ=255) ccAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCg < 2:55803/126‑1 (MQ=255) ccAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCg > 1:55803/1‑126 (MQ=255) gTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATcccgg > 2:164420/1‑118 (MQ=255) gTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCg < 1:164420/120‑1 (MQ=255) tttGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGc > 6:239579/1‑149 (MQ=255) tGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCt < 5:284198/148‑1 (MQ=255) cGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAgc < 5:77857/149‑1 (MQ=255) gaCGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGT‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACAAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGcc < 4:220526/149‑1 (MQ=255) aCGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCg < 8:366769/149‑1 (MQ=255) cGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCTAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCgg < 1:268711/149‑1 (MQ=255) cGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCTAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCgg < 1:274632/149‑1 (MQ=255) tCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCtt > 6:364316/1‑149 (MQ=255) gcgTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTg < 2:43339/148‑1 (MQ=255) gcgTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACACCAGCCAGGTACGCCCGCTGAGCGCCGGCTTg > 6:161696/1‑148 (MQ=255) cgTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTa < 2:221580/149‑1 (MQ=255) gTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAg > 7:345524/1‑149 (MQ=255) gTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAg < 5:364316/149‑1 (MQ=255) ttcttcGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGAACACCGCCAGCACAACGCAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCCGCTTGTAgc > 6:356548/1‑149 (MQ=255) cttcGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAgcg > 5:377002/1‑148 (MQ=255) ttcGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCt > 8:304908/1‑129 (MQ=255) ttcGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCt < 7:304908/129‑1 (MQ=255) cGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCAc < 5:402550/148‑1 (MQ=255) ggCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCAc < 5:381876/147‑1 (MQ=255) ggCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCAc > 6:381876/1‑147 (MQ=255) gACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTc < 3:173003/149‑1 (MQ=255) aCAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCg > 6:29708/1‑149 (MQ=255) aCTCATCGGCGCCCTCC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGACCTCGCCa < 5:127128/149‑1 (MQ=255) cATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCtt > 2:76441/1‑127 (MQ=255) cATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCtt < 1:76441/127‑1 (MQ=255) gccGGCGCCGTGCTACGGCCGT‑GCAGGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGc < 1:309593/122‑1 (MQ=38) gccGGCGCCGTGCTACGGCCGT‑GCAGGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGc > 2:309593/3‑124 (MQ=38) cGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCATAGCgg > 2:217531/1‑149 (MQ=255) ggCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCATAGCGGt < 5:29708/149‑1 (MQ=255) gcgcCGTGCTACGGCCGT‑GCAGGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCATAGCGGTc > 3:378683/1‑149 (MQ=255) gcgcCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCATAGCGGTc > 6:177087/1‑149 (MQ=255) cccTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCATAGCGGTCGAc < 5:239579/149‑1 (MQ=255) | AGCAGCAAAAAGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTGGCGAGACGCTCGCGTTCTTCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCATAGCGGTCGAC > NC_002947/4911650‑4911925 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |