New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 123998 = | 81 (1.270) | 5 (0.080) | 5/246 | NT | 6.0% | coding (636/774 nt) | znuC | zinc ABC transporter ATP‑binding protein |
? | NC_002947 | 124030 = | 79 (1.270) | coding (604/774 nt) | znuC | zinc ABC transporter ATP‑binding protein |
CCTCATCACCCGCCTGCGCGACCGCCACGGCTGCGGCGTGCTGATGGTGTCCCACGACCTGCACCTGGTCATGAGCGCCACCGACCAGGTGGTGTGCCTGAACCGCCACGTGTGCTGCTCGGGCCACCCTGAGCAAGTCAGCGGTGACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/124148‑123998 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgAGCAGCACACGTGGCGGTTCAGGCACACCACCTGGTCGGTGGCGCTCATGACCAGGTGCAGGTCGTGGGACACCATCAGCACGCCGCAGCCGTGGCGGTCGCGCAGGCGGGTGATGAGGTTGTAAAGCTCGGTCTGGCCGACCACG > NC_002947/124030‑124175 CCTCATCACCCGCCTGCGCGACCGCCACGGCTGCGGCGTGCTGATGGTGTCCCACGACCTGCACCTGGTCATGAGCGCCACCGACCAGGTGGTGTGCCTGAACCGCCACGTGTGCTGCTCGGGCCACCCTGAGCAAGTCAGCGGTGACC > 3:248453/1‑149 TGCTCGGGCCACCCTGAGCAAGTCAGCGGTGACCCGAGCAGCACACGTGGCGGTTCAGGCACACCACCTGGTCGGTGGCGCTCATGACCAGGTGCAGGTCGTGG < 7:184997/104‑1 TGCTCGGGCCACCCTGAGCAAGTCAGCGGTGACCCGAGCAGCACACGTGGCGGTTCAGGCACACCACCTGGTCGGTGGCGCTCATGACCAGGTGCAGGTCGTGG > 8:184997/1‑104 GCTCGGGCCACCCTGAGCAAGTCAGCGGTGACCCGAGCAGCACACGTGGCGGTTCAGGCACACCACCTGGTCGGTGGCGCTCATGACCAGGTGCAGGTCGTGGGACACCATCAGCACGCCGCAGCCGTGGCGGTCGCGCAGGCGGGTGA > 2:50757/1‑149 GGGCCACCCTGAGCAAGTCAGCGGTGACCCGAGCAGCACACGTGGCGGTTCAGGCAC < 7:270055/57‑1 GGGCCACCCTGAGCAAGTCAGCGGTGACCCGAGCAGCACACGTGGCGGTTCAGGCAC > 8:270055/1‑57 CCGAGCAGCACACGTGGCGGTTCAGGCACACCACCTGGTCGGTGGCGCTCATGACCAGGTGCAGGTCGTGGGACACCATCAGCACGCCGCAGCCGTGGCGGTCGCGCAGGCGGGTGATGAGGTTGTAAAGCTCGGTCTGGCCGACCACG > 7:191620/1‑149 CCTCATCACCCGCCTGCGCGACCGCCACGGCTGCGGCGTGCTGATGGTGTCCCACGACCTGCACCTGGTCATGAGCGCCACCGACCAGGTGGTGTGCCTGAACCGCCACGTGTGCTGCTCGGGCCACCCTGAGCAAGTCAGCGGTGACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/124148‑123998 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgAGCAGCACACGTGGCGGTTCAGGCACACCACCTGGTCGGTGGCGCTCATGACCAGGTGCAGGTCGTGGGACACCATCAGCACGCCGCAGCCGTGGCGGTCGCGCAGGCGGGTGATGAGGTTGTAAAGCTCGGTCTGGCCGACCACG > NC_002947/124030‑124175 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |