| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 201410 = | 68 (1.060) | 4 (0.070) | 4/242 | NT | 6.1% | coding (6916/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | 205438 = | 58 (0.950) | coding (10944/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
GAACGCAGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAAGCTGATCTGGC‑CAGCGTCCTGATAGACGTCATCGCCTTGCGCGTCGTGGGTGTACGGCGCGCTGGTTTCACCGGCCTTGATGGTGACCTGAGCGTTGTTGCTCAGGGTCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/201562‑201410‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcacCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCG > NC_002947/205438‑205537 GAACGCAGCACCAGTGGCGTCCACCGCCGAGTTGATGCCGAAGCTGATCTGGC‑CAGCGTCCTGATAGACGTCATCGCCTTGGGCGTCGTGGGTGTACGGCGCGCTGGTTTCACCGGCCTTGATGGTGACCTGAGCGTTGTTGCTCAGG < 3:380793/148‑1GAACGCAGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAAGCTGATCTGGC‑CAGCGTCCTGATAGACGTCATCGCCTTGCGCGTCGTGGGTGTACGGCGCGCTGGTTTCACCGGCCTTGATGGTGACCTGAGCGTTGTTGCTCAGG < 7:356711/148‑1 AACGCAGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAAGCTGATCTGGC‑CAGCGTCCTGATAGACGTCATCGCCTTGCGCGTCGTGGGTGTACGGCGCGCTGGTTCCACCGGCCTTGATGGTGACCTGAGCGTTGTTGCTCAGGGT < 6:383149/149‑1 CAGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAAGCTGATCTGGC‑CAGCGTCCTGATAGACGTCATCGCCTTGCGCGTCGTGGGTGTACGGCGCGCTGGTTTCACCGGCCTTGATGGTGACCTGAGCGTTGTTGCTCAGGGTCAC > 1:146077/1‑148 AGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAAGCTGATCTGGCTCAGCGTCCTGATAGACGTCATCGCCTTGCGCGTCGTGGGTGTACGGCGCGCTGGTTTCACCGGCCTTGATGGTGACCTGAGCGTTGTTGCTCAGGGTCAC > 1:89880/1‑148 CGCTGGTTTCACCGGCCTTGATGGTGACCTGGGCATTGTTGCTCAGGGTCACGA‑CCAGGTC‑GTG‑AGCCAGCGCGCCGTACACCCACGCTGCGCAGGGTGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCG > 2:129006/1‑149 CTTGATGGTGACCTGGGCATTGTTGCTCAGGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGCTGCGCAGGGTGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGTATC < 5:158117/127‑1 CTTGATGGTGACCTGGGCATTGTTGCTCAGGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGCTGCGCAGGGTGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGTATC > 6:158117/1‑127 GGTGACCTGGGCGTTGTTGCTCAGGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAAC < 6:361943/124‑1 GAACGCAGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAAGCTGATCTGGC‑CAGCGTCCTGATAGACGTCATCGCCTTGCGCGTCGTGGGTGTACGGCGCGCTGGTTTCACCGGCCTTGATGGTGACCTGAGCGTTGTTGCTCAGGGTCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/201562‑201410‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcacCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCG > NC_002947/205438‑205537 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |