| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 225167 = | 62 (0.970) | 5 (0.080) | 5/248 | NT | 7.1% | coding (494/630 nt) | PP_0173 | transcriptional factor‑like protein |
| ? | NC_002947 | 225271 = | 71 (1.140) | coding (390/630 nt) | PP_0173 | transcriptional factor‑like protein | |||||
GGCGCGAATCAGCGATGCACTGGCGCGGCAGTTGCGGGATGCGCCATTGAGCAGCGACATGCAACTGACGGCACTGGAGCATGGGCATCGGTTACGCGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/225268‑225167‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAAT > NC_002947/225271‑225418 GGCGCGAATCAGCGATGCACTGGCGCGGCAGTTGCGGGATGCGCCATTGAGCAGCGACATGCAACTGACGGCACTGGAGCATGGGCATCGGTTACGCGGCACCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCG > 1:178307/1‑147 GCGCGAATCAGCGATGCACTGGCGCGGCAGTTGCGGGATGCGCCATTGAGCAGCGACCTGCAACTGCCGGCACTGGAGCATGGGCATCGGTTACGCGGCACCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCG > 6:342854/1‑146 CGGGATGCGCCATTGAGCAGCGACATGCAACTGACGGCACTGGAGCATGGGCATCGGTTACGCGGCACCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTC > 5:129929/1‑149 ATGCAACTGACGGCACTGGAGCATGGGCATCGGTTACGCGGCACCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTG < 2:178307/149‑1 GCACTGGAGCATGGGCATCGGTTACGCGGCACCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGG < 6:129929/149‑1 CCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAAT < 1:165218/149‑1 CCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAA > 7:131027/1‑148 GGCGCGAATCAGCGATGCACTGGCGCGGCAGTTGCGGGATGCGCCATTGAGCAGCGACATGCAACTGACGGCACTGGAGCATGGGCATCGGTTACGCGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/225268‑225167‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacCAGCTCCACGCCCTCACCCTGCGATGGCTGCAACGCATCCCCTCGCAGATGTGTCAGCAAGTCGAAATTACCGCGCAATTCGCCCACGGCACTGGCCGACCAGTGCCAACCGAATGGAATGCTCTTGTCATTGCGTTCCAGCGGGAAT > NC_002947/225271‑225418 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |