| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 324739 | 58 (0.910) | 4 (0.070) | 4/240 | NT | 7.0% | coding (25/1320 nt) | oprQ | outer‑membrane porin D |
| ? | NC_002947 | = 324764 | 52 (0.860) | coding (50/1320 nt) | oprQ | outer‑membrane porin D | |||||
CAAGGGCCGCCGTGAAATTACCGGTCGGCCCACCCGGCTGGATCCGCATAGCGTCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/324587‑324739‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcctggGTCGCGGCGATCATCGCCAGGGCGACCAGGCTGATCCTGGTTTTCAACATGTTGTTTTCCTTATTTCTTAATCAAAAACGCGCTGCAATATGACGCCAGGAACCAACGCCCCTTCGTAGGTTCGACGCTATGCGGATCCAGCCGGG < NC_002947/324764‑324619 CAAGGGCCGCCGTGAAATTACCGGTCGGCCCAACCGGCTTGATCCGCATAGCGTCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGC < 6:328087/149‑1 GGGCCGCCGTGAAATTACCGGTCGGCCCACCCGGCTGGATCCGCATAGCGTCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGCTGATCCTG < 6:424087/149‑1 CCGGCTGGATCCGCATAGCGTCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGGTCGCGGCGATCATCGCCAGGGCGACCAG > 8:236604/1‑149 GATCCGCATAGCGTCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGGTCGCGGCGATCATCGCCAGGGCGACCAGGCTGA < 7:236604/147‑1 TTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGGTCGCGGCGATCATCGCCAGGGCGACCAGG > 3:270358/1‑107 TTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGGTCGCGGCGATCATCGCCAGGGCGACCAGG < 4:270358/107‑1 AGCCTGGGTCGCGGCGATCATCGCCAGGGCGACCAGGCTGATCCTGGTTTTCAACATGTTGTTTTCCTTATTTCTTAATCAAAAACGCGCTGCAATATGACGCCAGGAACCAACGCCCCTTCGTAGGTTCGACGCTATGCGGATCCA < 5:419595/147‑1 CCTGGGTCGCGGCGATCATCGCCAGGGCGACCAGGCTGATCCTGGTTTTCAACATGTTGTTTTCCTTATTTCTTAATCAAAAACGCGCTGCAATATGATGCCAGGAACCAACGCC > 3:400743/1‑115 CCTGGGTCGCGGCGATCATCGCCAGGGCGACCAGGCTGATCCTGGTTTTCAACATGTTGTTTTCCTTATTTCTTAATCAAAAACGCGCTGCAATATGATGCCAGGAACCAACGCC < 4:400743/115‑1 CTGGGTCGCGGCGATCATCGCCAGGGCGACCAGGCTGATCCTGGTTTTCAACATGTTGTTTTCCTTATTTCTTAATCAAAAACGCGCTGCAATATGACGCCAGGAACCAACGCCCCTTCGTAGGTTCGACGCTAT > 3:245282/1‑135 CTGGGTCGCGGCGATCATCGCCAGGGCGACCAGGCTGATCCTGGTTTTCAACATGTTGTTTTCCTTATTTCTTAATCAAAAACGCGCTGCAATATGACGCCAGGAACCAACGCCCCTTCGTAGGTTCGACGCTAT < 4:245282/135‑1 GGTCGCGGCGATCATCGCCAGGGCGACCAGGCTGATCCTGGTTTTCAACATGTTGTTTTCCTTATTTCTTAATCAAAAACGCGCTGCAATATGACGCCAGGAACCAACGCCCCTTCGTAGGTTCGACGCTATGCGGATCCAGCCGGG < 4:214562/147‑1 CAAGGGCCGCCGTGAAATTACCGGTCGGCCCACCCGGCTGGATCCGCATAGCGTCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/324587‑324739‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcctggGTCGCGGCGATCATCGCCAGGGCGACCAGGCTGATCCTGGTTTTCAACATGTTGTTTTCCTTATTTCTTAATCAAAAACGCGCTGCAATATGACGCCAGGAACCAACGCCCCTTCGTAGGTTCGACGCTATGCGGATCCAGCCGGG < NC_002947/324764‑324619 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |