| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 611504 = | NA (NA) | 13 (0.220) | 12/240 | NT | NA | coding (401/966 nt) | PP_0526 | transposase |
| ? | NC_002947 | 611533 = | NA (NA) | coding (430/966 nt) | PP_0526 | transposase | |||||
CCCCGCCTTCTTGATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/611658‑611504‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggcATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGCGCCGTG > NC_002947/611533‑611680 CCCCGCCTTCTTGATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGG > 8:315386/1‑149CCCCGCCTTCTTGATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGG > 3:276837/1‑149CCCCGCCTTCTTGATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGG > 7:37077/1‑149CCCCGCCTTCTTGATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGATCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGG > 4:283855/1‑149 CCCGCCTTCTTGATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGC > 4:345218/1‑149 CCCGCCTTCTTGATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGC < 5:130385/149‑1 CCCGCCTTCTTGATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGC < 2:132844/149‑1 CCCGCCTTCTTGATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGC > 5:26040/1‑149 CCCGCCTTCTTGATCACCGCACGCAGCTGTTTATCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGC > 4:80303/1‑149 CCGCCTTCTTGATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGCG > 6:9868/1‑149 CGCCTTCTTGATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGCGC > 5:423557/1‑149 CGCCTTCTTGATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGCGC > 5:273431/1‑149 GCCTTCTTGATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCTCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGCGCG < 2:374043/149‑1 CTTCTTGATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGCGCGGC > 5:230516/1‑149 GATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGG < 8:218575/137‑1 GATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGG > 7:218575/1‑137 GCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGCGC < 1:64035/133‑1 GCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGCGC > 2:64035/1‑133 ATGCCGCGCACTGCTACAAGTTTGGCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAG > 5:390367/1‑148 TGCCGCGCACTGCTACAAGTTTGGCGCGGCATGCTGCGGACGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAG > 7:142061/1‑147 GCCGCGCACTGCTACAAGTTTGGCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGC > 2:389469/1‑117 GCCGCGCACTGCTACAAGTTTGGCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGC < 1:389469/117‑1 GCCGCGCACTGCTACAAGTTTGGCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAAC > 3:215633/1‑102 GCCGCGCACTGCTACAAGTTTGGCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAAC < 4:215633/102‑1 CCGCGCACTGCTACAAGTTTGGCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGA > 7:353512/1‑87 CCGCGCACTGCTACAAGTTTGGCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGA < 8:353512/87‑1 CGCACTGCTACAAGTTTGGCGCGGCATGCTGCGGACGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGG < 8:142061/149‑1 ACTGCTACAAGTTTGGCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCG < 2:123658/109‑1 ACTGCTACAAGTTTGGCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCG > 1:123658/1‑109 TGCTACAAGTTTGGCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTT > 2:158509/1‑149 AGTTTGGCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATC < 1:158509/149‑1 GCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGC > 4:220208/1‑149 GCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGC > 2:104174/1‑149 tGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGC < 1:99020/147‑1 CGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGCG > 8:54440/1‑149 CGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGC < 5:23170/148‑1 CGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGC < 6:236815/148‑1 GCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGCGC > 5:42564/1‑149 CGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGCGCC < 5:321872/149‑1 CGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGCGCC < 7:85685/149‑1 GGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGCGCCG < 4:203857/149‑1 GCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGCGCCGT < 5:2287/149‑1 GCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAG > 2:290436/1‑119 GCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAG < 1:290436/119‑1 CATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGCGCCGTG < 1:272298/149‑1 CATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGG > 4:279226/1‑127 CCCCGCCTTCTTGATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/611658‑611504‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggcATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGCGCCGTG > NC_002947/611533‑611680 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |