| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 735457 = | 68 (1.060) | 6 (0.100) | 5/236 | NT | 10.0% | coding (118/174 nt) | PP_0627 | hypothetical protein |
| ? | NC_002947 | 735516 = | 45 (0.760) | coding (59/174 nt) | PP_0627 | hypothetical protein | |||||
TGCGCAGTCACAAACGTCTACCTGACGAGGCCCACCATGACCAGTCGCCTGAACCCGGAAGATCAGCGTCGTGTCGATGAGTATCTGCGAGCCCCCCAGCACCAAGTCGAGCGCAGGCCCTTCCGGCCGTGGCTGCTCCTTGTGCTGGTGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/735610‑735457‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtgctggGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTT > NC_002947/735516‑735657 TGCGCAGTCACAAACGTCTACCTGACGAGGCCCACCATGACCAGTCGCCTGAACCCGGAAGATCAGCGTCGTGTCGATGAGTATCTGCGAGCCCCCCAGCACCAAGTCGAGCGCAGGCCCTTCCGGCCGTGGCTGCTCCTTGTGCTGG < 8:189998/148‑1 CAGTCACAAACGGCTACCTGACGAGGCCCACCATGACCAGTCGGCTGAACCCGGAAGATCAGCGTCGTGTCGATGAGTATCTGCGAGCCCCCCAGCACCAAGTCGAGCGCAGGCCCTTCCGGCCGTGGCTGCTCCTTGTGCTGGTGCTG < 4:23463/149‑1 ACCTGACGAGGCCCACCATGACCATTCGCCTGAACCCGGAAGATCAGCGTCGTGTCGATGAGTATCTGCGAGCCCCCCAGCACCAAGTCGAGCGCAGGCCCTTCCGGCCGTGGCTGCTCCTTGTGCTGG < 8:131862/129‑1 CCCAGCACCAAGTCGAGCGCAGGCCCTTCCGGCCGTGGCTGCTCCTTGTGCTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGT > 5:332655/1‑146 CCCAGCACCAAGTCGAGCGCAGGCCCTTCCGGCCGTGGCTGCTCCTTGTGCTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGT < 6:332655/146‑1 GCACCAAGTCGAGCGCAGGCCCTTCCGGCCGTGGCTGCTCCTT‑‑‑‑‑‑GTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGT > 3:394764/1‑136 GCACCAAGTCGAGCGCAGGCCCTTCCGGCCGTGGCTGCTCCTT‑‑‑‑‑‑GTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGT < 4:394764/136‑1 CAAGTCGAGCGCAGGCCCTTCCGGCCGTGGCTGCTCCTTGTGCTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGG < 5:250100/116‑1 CAAGTCGAGCGCAGGCCCTTCCGGCCGTGGCTGCTCCTTGTGCTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGG > 6:250100/1‑116 GTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTT < 7:189998/149‑1 GCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTT < 5:7168/147‑1 GCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTT > 6:7168/1‑147 TGCGCAGTCACAAACGTCTACCTGACGAGGCCCACCATGACCAGTCGCCTGAACCCGGAAGATCAGCGTCGTGTCGATGAGTATCTGCGAGCCCCCCAGCACCAAGTCGAGCGCAGGCCCTTCCGGCCGTGGCTGCTCCTTGTGCTGGTGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/735610‑735457‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtgctggGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCTCGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTT > NC_002947/735516‑735657 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |