| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 780390 | 66 (1.030) | 5 (0.080) | 4/242 | NT | 7.0% | coding (81/954 nt) | PP_0670 | bile acid/Na+ symporter family transporter |
| ? | NC_002947 | = 780410 | 71 (1.160) | coding (61/954 nt) | PP_0670 | bile acid/Na+ symporter family transporter | |||||
AATGAAATTGGCCAGTAGCAGGGCCGTGATGAAGCGGCGGTTACCCAGGCCCTGGCGTAGGTTGAGGAAGGGTATTTGCAGGAACATCGCGTACATCAGCACGGCGATGGCGGGGGTGATCAGGGCTTCAAGCTGGCGCGCAGCGTCGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/780237‑780390‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccGCTATCGCCTTCGGCCTGCTGGCCAGCGACGCTGCGCGCCAGCTTGAAGCCCTGATCACCCCCGCCATCGCCGTGCTGATGTACGCGATGTTCCTGCAAATACCCTTCCTCAACCTACGCCAGGGCCTGGGTAACCGCCGCTTCAT < NC_002947/780410‑780265 AATGAAATTGGCCAGTAGCAGGGCCGTGATGAAGCGGCGGTTACCCAGGCCCTGGCGTAGGTTGAGGAAGGGTATTTGCAGGAACATCGCGTACATCAGCACGGCGATGGCGGGGGTGATCAGGGCTTCAAGCTGGCGCGCAGCGTCGC > 5:174056/1‑149 ATGAAATTGGCCAGTAGCAGGGCCGTGATGAAGCGGCGGTTACCCAGGCCCTGGCGTAGGTTGAGGAAGGGTATTTGCAGGAACATCGCGTACATCAGCACGGCGATGGCGGGGGTGATCAGGGCTTCAAGCTGGCGCGCAGCGTCGCT < 5:341103/149‑1 AAATTGGCCAGTAGCAGGGCCGTGATGAAGCGGCGGTTACCCAGGCCCTGGCGTAGGTTGAGGAAGGGTATTTGCAGGAACATCGCGTACATCAGCACGGCGATGGCGGGGGTGATCAGGGCTTCAAGCTGGCGCGCAGCGTCGCTGG < 3:247254/148‑1 AATTGGCCAGTAGCAGGGCCGTGATGAAGCGGCGGTTACCCAGGCCCTGGCGTAGGTTGAGGAAGGGTATTTGCAGGAACATCGCGTACATCAGCACGGCGATGGCGGGGGTGATCAGGGCTTCAAGCTGGCGCGCAGCGTCGCTGGC > 1:59131/1‑148 GTGATGAAGCGGCGGTTACCCAGGCCCTGGCGTAGGTTGAGGAAGGGTATTTGCAGGAACATCGCGTACATCAGCACGGCGATGGCGGGGGTGATCAGGGCTTCAAGCTGGCGCGCAGCGTCGCT > 7:284096/1‑125 GTGATGAAGCGGCGGTTACCCAGGCCCTGGCGTAGGTTGAGGAAGGGTATTTGCAGGAACATCGCGTACATCAGCACGGCGATGGCGGGGGTGATCAGGGCTTCAAGCTGGCGCGCAGCGTCGCT < 8:284096/125‑1 AAGCGGCGGTTACCCAGGCCCTGGCGTAGGTTGAGGAAGGGTATTTGCAGGAACATCGCGTACATCAGCACGGCGATGGCGGGGGTGATCAGGGCTTCAAGCTGGCGCGCAGCGTCGCTGGCCGCTATCGCCTTCGGCCTGCTGGCCAG < 8:53176/149‑1 TAGGTTGAGGAAGGGTATTTGCAGGAACATCGCGTACATCAGCACGGCGATGGCGGGGGTGATCAGGGCTTCAAGCTGGCGCGCAGCGTCTCTGGCCGCTATCGCCTTCGGCCTGCTGGCCAGCGA < 8:276909/126‑1 TAGGTTGAGGAAGGGTATTTGCAGGAACATCGCGTACATCAGCACGGCGATGGCGGGGGTGATCAGGGCTTCAAGCTGGCGCGCAGCGTCACTGGCCGCTATCGCCTTCGGCCTGCTGGCCAGCGA > 7:276909/1‑126 GCGTACATCAGCACGGCGATGGCGGGGGTGATCAGGGCTTCAAGCTGGCGCGCAGCGTCGCTGGCCGCTATCGCCTTCGGCCTGCTGGCCAG < 1:42250/92‑1 GCGTACATCAGCACGGCGATGGCGGGGGTGATCAGGGCTTCAAGCTGGCGCGCAGCGTCGCTGGCCGCTATCGCCTTCGGCCTGCTGGCCAG > 2:42250/1‑92 GCCGCTATCGCCTTCGGCCTGCTGGCCAGCGACGCTGCGCGCCAGCTTGAAGCCCTGATCACCCCCGCCATCGCCGTGCTGATGTACGCGATGTTCCTGCAAATACCCTTCCTCAACCTACGCCAGGGCCTGGGTAACCGCCGCTTCAT < 7:175748/149‑1 AATGAAATTGGCCAGTAGCAGGGCCGTGATGAAGCGGCGGTTACCCAGGCCCTGGCGTAGGTTGAGGAAGGGTATTTGCAGGAACATCGCGTACATCAGCACGGCGATGGCGGGGGTGATCAGGGCTTCAAGCTGGCGCGCAGCGTCGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/780237‑780390‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccGCTATCGCCTTCGGCCTGCTGGCCAGCGACGCTGCGCGCCAGCTTGAAGCCCTGATCACCCCCGCCATCGCCGTGCTGATGTACGCGATGTTCCTGCAAATACCCTTCCTCAACCTACGCCAGGGCCTGGGTAACCGCCGCTTCAT < NC_002947/780410‑780265 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |