| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 872432 = | 66 (1.030) | 5 (0.080) | 3/238 | NT | 7.2% | coding (730/1272 nt) | PP_0756 | hypothetical protein |
| ? | NC_002947 | 872492 = | 67 (1.120) | coding (670/1272 nt) | PP_0756 | hypothetical protein | |||||
CCGTTCGATCAGCGGGCGGCGCGAAAAACTGGCTGCTTACCAACTGCTGTCGGCTTACATCAACCACTCGATCCGCAACGATGCCACCTCGATCTGGATCGCCCAGGCCGAAGGTCGGGCCAAGGACGGTGACGACCGTACCGACTCGGCGATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/872586‑872432‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgatccAGATCGAGGTGGCATCGTTGCGGATCGAGTGGTTGATGTAAGCCGACAGCAGTTGGTAAGCAGCCAGTTTTTCGCGCCGCCCGCTGATCGAACGGTGCACGATGAAGCTCTTGTTCAGGCGCATCATGTCGCTGACAAAGGG > NC_002947/872492‑872633 CCGTTCGATCAGCGGGCGGCGCGAAAAACTGGCTGCTTACCAACTGCTGTCGGCTTACATCAAGCACTCGATCCGCAACGATGCCACCTCGATCTGGATCGCCCAGGCCGAAGGTCGGGCCAAGGACGGTGACGACCGTAGCGACTCGG > 4:140495/1‑149CCGTTCGATCAGCGGGCGGCGCGAAAAACTGGCTGCTTACCAACTGCTGTCGGCTTACATCAACCACTCGATCCGCAACGATGCCACCTCGATCTGGATCGCCCAGGCCGAAGGTCGGGCCAAGGACGGTGACGACCGTACCGACTCGG < 2:298235/149‑1CCGTTCGATCAGCGGGCGGCGCGAAAAACTGGCTGCTTACCAACTGCTGTCGGCTTACATCAACCACTCGATCCGCAACGATGCCACCTCGATCTGGATCGCCCAGGCCGAAGGTCGGGCCAAGGACGGTGACGACCGTACCGACTCGG < 4:296743/149‑1 GTTCGATCAGCGGGCGGCGCGAAAAACTGGCTGCTTACCAACTGCTGTCGGCTTACATCAACCACTCGATCCGCAACGATGCCACCTCGATCTGGATCGCCCAGGCCGAAGGTCGGGCCAAGGACGGTGACGACCGTACCGACTCGGCG < 5:189600/149‑1 GTTCGATCAGCGGGCGGCGCGAAAAACTGGCTGCTTACCAACTGCTGTCGGCTTACATCAACCACTCGATCCGCAACGATGCCACCTCGATCTGGATCGCCCAGGCCGAAGGTCGGGCCAAGGACGGTGACGACCGTACCGACTCGGCG < 6:135888/149‑1 GTTCGATCAGCGGGCGGCGCGAAAAACTGGCTGCTTACCAACTGCTGTCGGCTTACATCAACCACTCGATCCGCAACGATGCCACCTCGATCTGGATCGCCCAGGCCGAAGGTCGGGCCAAGGACGGTGACGACCGTACCGACTCGGC > 5:2310/1‑148 GATCAGCGGGCGGCGCGAAAAACTGGCTGCTTACCAACTGCTGTCGGCTTACATCAACCACTCGATCCGCAACGATGCCACCTCGATCTGGATCGCCCAGGCCGAAGGTCGGGCCAAGGACGGTGACGACCGTACCGACTCGGCGATCC < 5:263036/149‑1 GATCAGCGGGCGGCGCGAAAAACTGGCTGCTTACCAACTGCTGTCGGCTTACATCAACCACTCGATCCGCAACGATGCCACCTCGATCTGGATCGCCCAGGCCGAAGGTCGGGCCAAGGACGGTGACGACCGTACCGACTCGGCGATC < 8:28200/148‑1 CTGTCGGCTTACATCAACCACTCGATCCGCAACGATGCCACCTCGATCTGGATCGCCCAGGCCGAAGGTCGGGCCAAGGACGGTGACGACCGTACCGACTCGGCGATC < 3:215432/108‑1 CTGTCGGCTTACATCAACCACTCGATCCGCAACGATGCCACCTCGATCTGGATCGCCCAGGCCGAAGGTCGGGCCAAGGACGGTGACGACCGTACCGACTCGGCGATC > 4:215432/1‑108 TCGATCTGGATCGCCCAGGCCGAAGGTCGGGCCAAGGACGGTGACGACCGTACCGACTCGGCGATCCAGATCGAGGTGGCATCGTTGCGGATCGAGTGGTTGATGTAAGCCGACAGCAGTTGGTAAGCAGCCAGTTTTTCGCGCCGCCC > 2:303297/1‑149 GATCGCCCAGGCCGAAGGTCGGGCCAAGGACGGTGACGACCGTACCGACTCGGCGATCCAGATCGAGGTGGCATCGTTGCGGATCGAGTGGTTGATGTAAGCCGACAGCAGTTGGTAAGCAGCCAGTTTTTCGCGCCGCCCGCTGATC > 4:379652/1‑148 GATCGCCCAGGCCGAAGGTCGGGCCAAGGACGGTGACGACCGTACCGACTCGGCGATCCAGATCGAGGTGGCATCGTTGCGGATCGAGTGGTTGATGTAAGCCGACAGCAGTTGGTAAGCAGCCAGTTTTTCGCGCCGCCCGCTGATC > 6:195150/1‑148 GATCGCCCAGGCCGAAGGTCGGGCCAAGGACGGAGACCACCGTACCGACACGGCGATCCAGATCGAGGTCGCAACGTAGCGCATCGAGTGGTTGATCTAAGCCGACAGCAGTTGGAAATCAGCCAGTTATTCTCGCCGACCGCTCATC > 1:160440/1‑148 GGGCCAAGGACGGTGACGACCGTACCGACTCGGCGATCCAGATCGAGGTGGCATCGTTGCGGATCGAGTGGTTGATGTAAGCCGACAGCAGTTGGTAAGAAGCCAGTTTTTCGCGCCGCCCGCTGATCGAACGGTGCACGATGAAGCTC < 1:303297/149‑1 GCGATCCAGATCGAGGTGGCATCGTTGCGGATCGAGTGGTTGATGTAAGCCGACAGCAGTTGGTAAGCAGCCAGTTTTTCGCGCCGCCCGCTGATCGAACGGTGCACGATGAAGCTCTTGTTCAGGCGAATCATGTCGCTGACAAAGGG > 3:175092/1‑149 CCGTTCGATCAGCGGGCGGCGCGAAAAACTGGCTGCTTACCAACTGCTGTCGGCTTACATCAACCACTCGATCCGCAACGATGCCACCTCGATCTGGATCGCCCAGGCCGAAGGTCGGGCCAAGGACGGTGACGACCGTACCGACTCGGCGATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/872586‑872432‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgatccAGATCGAGGTGGCATCGTTGCGGATCGAGTGGTTGATGTAAGCCGACAGCAGTTGGTAAGCAGCCAGTTTTTCGCGCCGCCCGCTGATCGAACGGTGCACGATGAAGCTCTTGTTCAGGCGCATCATGTCGCTGACAAAGGG > NC_002947/872492‑872633 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |