| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 876828 = | 53 (0.830) | 4 (0.070) | 4/242 | NT | 7.2% | coding (331/999 nt) | rsmC | 16S rRNA methyltransferase |
| ? | NC_002947 | 876899 = | 52 (0.850) | coding (260/999 nt) | rsmC | 16S rRNA methyltransferase | |||||
GGCGTCGAGGCCCCTGAAGCAGCATTCGACAGCGCCGTGCTGTTCCTGCCCAAATCCCGCGAGCTGGCCGCCTATCTGCTCAACGCCCTGGCATCGCGCCTGGCTGGCCGCGAGCTGTACCTGGTCGGCGAGAAGCGCGGTGGCATCGAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/876981‑876828‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggcgTTGAGCAGATAGGCGGCCAGCTCGCGGGATTTGGGCAGGAACAGCACGGCGCTGTCGAATGCTGCTTCAGGGGCCTCGACGCCGTAATGGCTGCGGCCTGCGAAGCGGCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAG > NC_002947/876899‑877045 GGCGTCGAGGCCCCTGAAGCAGCATTCGACAGCGCCGTGCTGTTCCTGCCCAAATCCCGCGAGCTGGCCGCCTATCTGCTCAACGCCCTGGCATCGCGCCTGGCTGGCCGCGAGCTGTACCTGGTCGGCGAGAAGCGCGGTGGCATCGA < 3:329902/149‑1 GCCTATCTGCTCAACGCCCTGGCATCGCGCCTGGCTGGCCGCGAGCTGTACCTGGTCGGCGAGAAGCGCGGTGGCATCGAGGGCGTTGAGCAGATAGGCGGCCAGCTCGCGGGATTTGGGCAGGAACAGCACGGCGCTGTCGAATGCTG > 4:247415/1‑149 CAACGCCCTGGCATCGCGCCTGGCTGGCCGCGAGCTGTACCTGGTCGGCGAGAAGCGCGGTGGCATCGAGGGCGTTGAGCAGATAGGCGGCCAGCTCGCGGGATTTG < 5:422718/107‑1 CAACGCCCTGGCATCGCGCCTGGCTGGCCGCGAGCTGTACCTGGTCGGCGAGAAGCGCGGTGGCATCGAGGGCGTTGAGCAGATAGGCGGCCAGCTCGCGGGATTTG > 6:422718/1‑107 ACGCCCTGGCATCGCGCCTGGCTGGCCGCGAGCTGTACCTGGTCGGCGAGAAGCGCGGTGGCATCGAGGGCGTTGAGCAGATAGGCGGCCAGCTCGCGGGATTTGGGCAGGAACAGCACGGCGCTGTCGAATGCTGCTTCAGGGGCCTC < 3:247415/149‑1 AGGGCGTTGAGCAGATAGGCGGCCAGCTCGCGGGATTTGGGCAGGAACAGCACGGCGCTGTCGAATGCTGCTTCAGGGGCCTCGACGCCGTAATGGCTGCGGCCTGCGAAGCGGCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGT > 4:217080/1‑149 GGGCGTTGAGCAGATAGGCGGCCAGCTCGCGGGATTTGGGCAGGAACAGCACGGCGCTGTCGAATGCTGCTTCAGGGGCCTCGACGCCGTAATGGCTGCGGCCTGCGAAGCGGCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTC > 1:1256/1‑149 GGGCGTTGAGCAGATAGGCGGCCAGCTCGCGGGATTTGGGCAGGAACAGCACGGCGCTGTCGAATGCTGCTTCAGGGGCCTCGACGCCGTAATGGCTGCGGCCTGCGAAGCGGCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTC > 1:160756/1‑149 GGGCGTTGAGCAGATAGGCGGCCAGCTCGCGGGATTTGGGCAGGAACAGCACGGCGCTGTCGAATGCTGCTTCAGGGGCCTCGACGCCGTAATGGCTGCGGCCTGCGAAGCGGCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTC > 5:117234/1‑149 CGTTGAGCAGATAGGCGGCCAGCTCGCGGGATTTGGGCAGGAACAGCACGGCGCTGTCGAATGCTGCTTCAGGGGCCTCGACGCCGTAATGGCTGCGGCCTGCGAAGCGGCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAG < 4:329902/149‑1 GGCGTCGAGGCCCCTGAAGCAGCATTCGACAGCGCCGTGCTGTTCCTGCCCAAATCCCGCGAGCTGGCCGCCTATCTGCTCAACGCCCTGGCATCGCGCCTGGCTGGCCGCGAGCTGTACCTGGTCGGCGAGAAGCGCGGTGGCATCGAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/876981‑876828‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggcgTTGAGCAGATAGGCGGCCAGCTCGCGGGATTTGGGCAGGAACAGCACGGCGCTGTCGAATGCTGCTTCAGGGGCCTCGACGCCGTAATGGCTGCGGCCTGCGAAGCGGCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAG > NC_002947/876899‑877045 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |