New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	905039 =	74 (1.160)	4 (0.070)	3/240	NT	5.1%	coding (1298/2160 nt)	PP_0788	hypothetical protein
	?	NC_002947	905081 =	79 (1.310)					coding (1340/2160 nt)	PP_0788	hypothetical protein

GAGCACGTGCTGCACCTGCTGCCTGGCCTGCATTGCCCGGGCACGGCCTTCTTCGGCGTCGCGAGTGCGTTGCTCCAGCAACTCGTTACGTCGCCGTTCGTCCTGATTGAATGCCAGGAAGTCGTCGAGCAGCTCGGCGAACAGGCTGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/905190‑905039 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcatTCAATCAGGACGAACGGCGACGTAACGAGTTGCTGGAGCAACGCACTCGCGACGCCGAAGAAGGCCGTGCCCGGGCAATGCAGGCCAGGCAGCAGGTGCAGCACGTGCTCAACCAGCGCCTGCGCGGTCGGGTATTGCCGCAGGTGG  >  NC_002947/905081‑905227                                                                                                                                                                                                                                                                                                             GAGCACGTGCTGCACCTGCTGCCTGGCCTGCATTGCCCGGGCACGGCCTTCTTCGGCGTCGCGAGTGCGTTGCTCCAGCAACTCGTTACGTCGCCGTTCGTCCTGATTGAATACCAGGAAGTCGTCGAGCAGCTCGGCGAACAGGCTG                                                                                                                                                         <  8:322934/148‑1  AGCACGTGCTGCACCTGCTGCCTGGCCTGCATTGCCCGGGCACTGCCTTCTTCGGCGTCGCGAGTGCGTTGCTCCAGCAACTCGTTACGTCGCCGTTCGTCCTGATTGAATGCCAGGAAGTCGTCGAGCAGCTCGGCGAACAGGCTGG                                                                                                                                                        >  2:277066/1‑148    CACGTGCTGCACCTGCTGCCTGGCCTGCATTGCCCGGGCACGGCCTTCTTCGGCGTCGCGAGTGCGTTGCTCCAGCAACTCGTTACGTCGCCGTTCGTCCTGATTGAATGCCAGGAAGTCGTCGAGCAGCTCGGCGAACAGGCTGGCAT                                                                                                                                                     >  6:51238/1‑149               CCTGCTGCCTGGCCTGCATTGCCCGGGCACGGCCTTCTTCGGCGTCGCGAGTGCGTTGCTCCAGCAACTCGTTACGTCGCCGTTCGTCCTGATTGAATGCCAGGAAGTCGTCGAGCAGCTCGGCGAACAGGC                                                                                                                                                           >  3:175290/1‑132               CCTGCTGCCTGGCCTGCATTGCCCGGGCACGGCCTTCTTCGGCGTCGCGAGTGCGTTGCTCCAGCAACTCGTTACGTCGCCGTTCGTCCTGATTGAATGCCAGGAAGTCGTCGAGCAGCTCGGCGAACAGGC                                                                                                                                                           <  4:175290/132‑1                                ATTGCCCGGGCACGGCCTTCTTCGGCGTCGCGAGTGCGTTGCTCCAGCAACTCGTTACGTCGCCGTTCGTCCTGATTGAATGCCAGGAAGTCGTCGAGCAGCTCGGCGAACAGGCTGGC                                                                                                                                                       >  1:248525/1‑119                                ATTGCCCGGGCACGGCCTTCTTCGGCGTCGCGAGTGCGTTGCTCCAGCAACTCGTTACGTCGCCGTTCGTCCTGATTGAATGCCAGGAAGTCGTCGAGCAGCTCGGCGAACAGGCTGGC                                                                                                                                                       <  2:248525/119‑1                                                                                                         GATTGATTGCCAGGAAGTCGTCGAGCAGCTCGGCGAACAGGCTGGCATTCATTCAGGACGATCGGCGACGTAACGAGTTGATGGAGCAACGCACTCGCGACGCCGAAGAAGGCGCTGACCGGGCAATGCAGGCCAGGCAGCAGGTGCAG                                                >  7:264009/1‑149                                                                                                         GATTGAATGCCAGGAAGTCGTCGAGCAGCTCGGCGAACAGGCTGGCATTCAATCAGGACGAACGGCGACGTAACGAGTTGCTGGAGCAACGCACTCGCGACGCCGAAGAAGGCCGTGCCCGGGCAATGCAGGCCAGGCAGCAGGTGCAG                                                >  7:264007/1‑149                                                                                                              AATGCCAGGAAGTCGTCGAGCAGCTCGGCGAACAGGCTGGCATTCAATCAGGACGAACGGCGACGTAACGAGTTGCTGGAGCAACGCACTCGCGACGCCGAAGAAGGCCGTGCCCGGGCAATGCAGG                                                                 <  3:18223/127‑1                                                                                                              AATGCCAGGAAGTCGTCGAGCAGCTCGGCGAACAGGCTGGCATTCAATCAGGACGAACGGCGACGTAACGAGTTGCTGGAGCAACGCACTCGCGACGCCGAAGAAGGCCGTGCCCGGGCAATGCAGG                                                                 >  4:18223/1‑127                                                                                                                                                   TGGCATTCAATCAGGACGAACGGCGACGTAACGAGTTGCTGGAGCAACGCACTCGCGACGCCGAAGAAGGCCGTGCCCGGGCAATGCAGGCCAGGCAGCAGGTGCAGCACGTGCTCAACCAGCGCCTGCGCGGTCGGGTATTGCCGCAG      >  3:92461/1‑149                                                                                                                                                     GCATTCAATCAGGACGAACGGCGACGTAACGAGTTGCTGGAGCAACGCACTCGCGACGCCGAAGAAGGCCGTGCCCGGGCAATGCAGGCCAGGCAGCAGGTGCAGCACGTGCTCAACCAGCGCCTGCGCGGTCGGGTATTGCCGCAG      <  5:17020/147‑1                                                                                                                                                     GCATTCAATCAGGACGAACGGCGACGTAACGAGTTGCTGGAGCAACGCACTCGCGACGCCGAAGAAGGCCGTGCCCGGGCAATGCAGGCCAGGCAGCAGGTGCAGCACGTGCTCAACCAGCGCCTGCGCGGTCGGGTATTGCCGCAG      <  1:240792/147‑1                                                                                                                                                     GCATTCAATCAGGACGAACGGCGACGTAACGAGTTGCTGGAGCAACGCACTCGCGACGCCGAAGAAGGCCGTGCCCGGGCAATGCAGGCCAGGCAGCAGGTGCAGCACGTGCTCAACCAGCGCCTGCGCGGTCGG                  <  2:306502/135‑1                                                                                                                                                     GCATTCAATCAGGACGAACGGCGACGTAACGAGTTGCTGGAGCAACGCACTCGCGACGCCGAAGAAGGCCGTGCCCGGGCAATGCAGGCCAGGCAGCAGGTGCAGCACGTGCTCAACCAGCGCCTGCGCGGTCGG                  >  1:306502/1‑135                                                                                                                                                       ATTCAATCAGGACGAACGGCGACGTAACGAGTTGCTGGAGCAACGCACTCGCGACGCCGAAGAAGGCCGTGCCCGGGCAATGCAGGCCAGGCAGCAGGTGCAGCACGTGCTCAACCAGCGCCTGCGCGGTCGGGTATTGCCGCAGGTGG  <  1:188837/149‑1                                                                                                                                                       ATTCAATCAGGACGAACGGCGACGTAACGAGTTGCTGGAGCAACGCACTCGCGACGCCGAAGAAGGCCGTGCCCGGGCAATGCAGGCCAGGCAGCAGGTGCAGCACGTGCTCAACCAGCGCCTGCGCGGTCGGGTATTGCCGCAGGTGG  >  2:314899/1‑149                                                                                                                                                                                                                                                                                                             GAGCACGTGCTGCACCTGCTGCCTGGCCTGCATTGCCCGGGCACGGCCTTCTTCGGCGTCGCGAGTGCGTTGCTCCAGCAACTCGTTACGTCGCCGTTCGTCCTGATTGAATGCCAGGAAGTCGTCGAGCAGCTCGGCGAACAGGCTGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/905190‑905039 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcatTCAATCAGGACGAACGGCGACGTAACGAGTTGCTGGAGCAACGCACTCGCGACGCCGAAGAAGGCCGTGCCCGGGCAATGCAGGCCAGGCAGCAGGTGCAGCACGTGCTCAACCAGCGCCTGCGCGGTCGGGTATTGCCGCAGGTGG  >  NC_002947/905081‑905227

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.