New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 96748842 (0.660)5 (0.080) 5/242 NT 9.7% coding (334/480 nt) PP_0830 acetyltransferase
?NC_002947 = 967512 53 (0.870)coding (310/480 nt) PP_0830 acetyltransferase

CACCAACGCTACCCGCGTGCCATCCCACGCCTGCCGCTCCTCGATGCCGAACGGCATGAAACCCAGTTGTGGATAAAGCAGCAGGCCGGCGGTGTTGTGATTGAAGCATGACACCCAGACCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/967366‑967488
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacctcGCCCGCCAGCAGTACAGCGCCCGGGAGGTCTGGGTGTCATGCTTCAATCACAACACCGCCGGCCTGCTGCTTTATCCACAACTGGGTTTCATGCCGTTCGGCATCGAGGAGCGGCAGGCGTGGGATGGCACGCGGGTAGCGTTGGT  <  NC_002947/967512‑967367
                                                                                                                                                                                                                                                                               
CACCAACGCTACCCGCGTGCCATCCCACGCCTGCCGCTCCTCGATGCCGAACGGCATGAAACCCAGTTGTGGATAAAGCAGCAGGCCGGCGGTGTTGTGATTGAAGCATGACACCCAGACCT‑‑CCCGCCAGCAGTACAGCGCCCGGGAGG                                                                                                                        >  4:284385/1‑149
    AACGCTACCCGCGTGCCATCCCACGCCTGCCGCTCCTCGATGCCGAACGGCATGAAACCCAGTTGTGGATAAAGCAGCAGGCCGGCGGTGTTGTGATTGAAGCATGACACCCAGACCT‑‑CCCGCCAGCAGTACAGCGCCCGGGAGGTCTG                                                                                                                    <  3:284385/149‑1
       GCTACCCGCGTGCCATCCCACGCCTGCCGCTCCTCGATGCCGAACGGCATGAAACCCAGTTGTGGATAAAGCAGCAGGCCGGCGGTGTTGTGATTGAAGCATGACACCCAGACCTCGCCCGCCAGCAGTACAGCGCCCGGGAGGTCTGG                                                                                                                   <  5:426549/149‑1
       GCTACCCGCGTGCCATCCCACGCCTGCCGCTCCTCGATGCCGAACGGCATGAAACCCAGTTGTGGATAAAGCAGCAGGCCGGCGGTGTTGTGATTGAAGCATGACACCCAGACCTCGCCCGCCAGCAGTACAGCGCCCGGGAGGTCTGG                                                                                                                   >  6:426549/1‑149
                                                                                              TTGTGATTGAAGCATGACACCCAGACCTCCCGGGCGCTGTACTGCTGGCGGGCGAGGTCTGGGTGTCATGCTTCAATCACAACACCGCCGGCCTGCTGCTTTATCCACAACTGGGTTTCATGCCGTTCGGCATCGAGGAGCGGCAGGCG                            >  7:214327/1‑149
                                                                                                                     GACCTCGCCCGCCAGCAGTACAGCGCCCGGGAGGTCTGGGTGTCATGCTTCAATCACAACACCGCCGGCCTGCTGCTTTATCCACAACTGGGTTTCATGCCGTTCGGCATCGAGGAGCGGCAGGCGTGGGATGGCACGCGGGTAGCGTT     >  4:105284/1‑149
                                                                                                                      ACCTCGCCCGCCAGCAGTACAGCGCCCGGGAGGTCTGGGTGTCATGCTTCAATCACAACACCGCCGGCCTGCTGCTTTATCCACAACTGGGTTTCATGCCGTTCGGCATCGAGGAGCGGCAGGCGTGGGATGGCACGCGGGTAGCGTTG    >  1:87295/1‑149
                                                                                                                       CCTCGCCCGCCAGCAGTACAGGGCCCGGGTGGTCTGGGTTGCATGCTTCATCACAACACCGCCGGCCTGCTGCTTTATCCACAACTGGGTTTCATGCCGTTCGGCATCGAGGAGCGGCAGGCGTGGGATGGCACGCGGGTAGCGTTGGT  <  1:351659/149‑1
                                                                                                                        CTCGCCCGCCAGCAGTACAGCGCCCGGGAGGTCTGGGTGTCATGCTTCAATCACAACACCGCCGGCCTGCTGCTTTATCCACAACTGGGT                                                             <  5:342486/90‑1
                                                                                                                        CTCGCCCGCCAGCAGTACAGCGCCCGGGAGGTCTGGGTGTCATGCTTCAATCACAACACCGCCGGCCTGCTGCTTTATCCACAACTGGGT                                                             >  6:342486/1‑90
                                                                                                                                                                                                                                                                               
CACCAACGCTACCCGCGTGCCATCCCACGCCTGCCGCTCCTCGATGCCGAACGGCATGAAACCCAGTTGTGGATAAAGCAGCAGGCCGGCGGTGTTGTGATTGAAGCATGACACCCAGACCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/967366‑967488
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacctcGCCCGCCAGCAGTACAGCGCCCGGGAGGTCTGGGTGTCATGCTTCAATCACAACACCGCCGGCCTGCTGCTTTATCCACAACTGGGTTTCATGCCGTTCGGCATCGAGGAGCGGCAGGCGTGGGATGGCACGCGGGTAGCGTTGGT  <  NC_002947/967512‑967367

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.