| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1036779 = | 61 (0.950) | 3 (0.050) | 3/240 | NT | 5.4% | coding (484/591 nt) | PP_0895 | hypothetical protein |
| ? | NC_002947 | 1036839 = | 48 (0.790) | coding (544/591 nt) | PP_0895 | hypothetical protein | |||||
CCAGGTTTCGTGCAGCTCGATGGCGTACTGGCAGGCTGCCAGGCGGATCATACCGGCAGTGCCTTGAGCCAGAACGACATCAGCTTGTCGGAGCTTTCCTGCTCGTCCAGGTCGCGCCAGGCGTAGGTGGTACGCAGCGATGGGTCGTGCAGGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1036933‑1036779‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggaaAGCTCCGACAAGCTGATGTCGTTCTGGCTCAAGGCACTGCCGGTATGATCCGCCTGGCAGCCTGCCAGTACGCCATCGAGCTGCACGAAACCTGGGACGCCTACGCCGACCACCTGCAAGGCCTGTGCGCCGAAGCGGTGGAGGCGG > NC_002947/1036839‑1036985 CCAGGTTTCGTGCAGCTCGATGGCGTACTGGCAGGCTGCCAGGCGGATCATACCGGCAGTGCCTTGAGCCAGAACGACATCAGCTTGTCGGAGCTTTCCTGCTCGTCCAGGTCGCGCCAGGCGTAGGTGGTACGCAGCGATGGGTCGTG > 5:204755/1‑149CCAGGTTTCGTGCAGCTCGATGGCGTACTGGCAGGCTGCCAGGCGGATCATACCGGCAGTGCCTTGAGCCAGAACGACATCAGCTTGTCGGAGCTTTCCTGCTCGTCCAGGTCGCGCCAGGCGTAGGTGGTACGCAGCGATGGGTCGTG > 6:334844/1‑149 GTTTGGTGCAGCTCGATGGCGTACTGGCAGGCTGCCAGGCGGATCATACCGGCAGTGCCTTGAGCCAGAACGACATCAGCTTGTCGGAGCTTTCCTGGTCGTCCAGGTCGCGCCAGGCGTAGGTGGTACGCAGCGATGGGTCGTGCAGG < 2:32152/149‑1 GAGCTTTCCTGCTCGTCCAGGTCGCGCCAGGCGTAGGTGGTACGCAGCGATGGGTCGTGCAGGAAAGCTCCGACAAGCTGATGTCGTTCTGGCTCAAGGCACTGCCGGTATGATCCGCCTGGCAGCCTGCCAGTCCGCCCGCGAGCTGC > 4:263912/1‑149 CTTTCCTGCTCGTCCAGGTCGCGCCAGGCGTAGGTGGTACGCAGCGATGGGTCGTGCAGGAAAGCTCCGACAAGCTGATGTCGTTCTGGCTCAAGGCATTGCCGGTATGATCCGCCTGGCAGCCTGCCAGTACGCCATCGAGCTGCAC > 7:270748/1‑148 TCGCGCCAGGCGTAGGTGGTACGCAGCGATGGGTCGTGCAGGAAAGCTCCGACAAGCTGATGTCGTTCTGGCTCAAGGCATTGCCGGTATGATCCGCCTGGCAGCCTGCCAGTACGCCATCGAGCTGCACGAAACCTGGGACGCCTACG < 8:270748/149‑1 GAAAGCTCCGACAAGCTGATGTCGTTCTGGCTCAAGGCACTGCCGGTATGATCCGCCTGGCAGCCTGCCAGTACGCCATCGAGCTGCACGAAACCTGGGA < 1:66561/100‑1 GAAAGCTCCGACAAGCTGATGTCGTTCTGGCTCAAGGCACTGCCGGTATGATCCGCCTGGCAGCCTGCCAGTACGCCATCGAGCTGCACGAAACCTGGGA > 2:66561/1‑100 AAAGCTCCGACAAGCTGATGTCGTTCTGGCTCAAGGCACTGCCGGTATGATCCGCCTGGCAGCCTGCCAGTACGCCATCGAGCTGCACGAAACCTGGGACGCCTACGCCGACCACCTGCAAGGCCTGTGCGCCGAAGCGGTGGAGGCGG < 3:6281/149‑1 CCAGGTTTCGTGCAGCTCGATGGCGTACTGGCAGGCTGCCAGGCGGATCATACCGGCAGTGCCTTGAGCCAGAACGACATCAGCTTGTCGGAGCTTTCCTGCTCGTCCAGGTCGCGCCAGGCGTAGGTGGTACGCAGCGATGGGTCGTGCAGGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1036933‑1036779‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggaaAGCTCCGACAAGCTGATGTCGTTCTGGCTCAAGGCACTGCCGGTATGATCCGCCTGGCAGCCTGCCAGTACGCCATCGAGCTGCACGAAACCTGGGACGCCTACGCCGACCACCTGCAAGGCCTGTGCGCCGAAGCGGTGGAGGCGG > NC_002947/1036839‑1036985 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |