New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1332628	83 (1.300)	4 (0.070)	4/238	NT	5.1%	intergenic (+209/‑1047)	PP_1157/PP_1159	acetolactate synthase/membrane protein
	?	NC_002947	= 1332657	71 (1.180)					intergenic (+238/‑1018)	PP_1157/PP_1159	acetolactate synthase/membrane protein

GTGCCGGCAGGTGCTACATAGCAACCACTTCACGCCTCTTGCAATTGATCATTCTCAGGTTCTCTACTCATGGAGAACACGAGATCATGACTATTGGTTCAACACACAACCATCCTGCCGATCTGGCCATCGACCCTTCGCTGCCAACGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1332477‑1332628 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacggcgGTAGGACTCCCCCTACAAAATGCCTCGTACGCCGTTGGCAGCGAAGGGTCGATGGCCAGATCGGCAGGATGGTTGTGTGTTGAACCAATAGTCATGATCTCGTGTTCTCCATGAGTAGAGAACCTGAGAATGATCAATTGCAAGAGGC  <  NC_002947/1332657‑1332510                                                                                                                                                                                                                                                                                                              GTGCCGGCAGGTGCTACATAGCAACCACTTCACGCCTCTTGCAATTGATCATTCTCAGGTTCTCTACTCATGGAGAACACGAGATCATGACTATTGGTTCAACACACAACCATCCTGCCGATCTGGCCATCGACCCTTCGCTGCCAACG                                                                                                                                                         <  3:53773/149‑1   GCCGGCAGGTGCTACATAGCAACCACTTCACGCCTCTTGCAATTGATCATTCTCAGGTTCTCTACTCATGGAGAACACGAGATCATGACTATTGGTTCAACACACAACCATCCTGCCGATCTGGCCATCGACCCTTCGCTGCCAACGGC                                                                                                                                                       >  6:322570/1‑149               TACATAGCAACCACTTCACGCCTCTTGCAATTGATCATTCTCAGGTTCTCTACTCATGGAGAACACGAGATCATGACTATTGGTTCAACACACAACCATCCTGCCGATCTGGCCATCGACCCTTCGCTGCCAACGGCGGTAGGACTCCC                                                                                                                                           >  2:331844/1‑149                                          CAATTGATCATTCTCATGTTCTCTACTCATGGAGAACACGAGATCATGACTATTGGTTCAACACACAACCATCCTGCCGATCTGGCCATCGACCCTTCGCTGCCAACGGCAGTAGGACTCCCCCTACAAAATGCCTCGTACGCCGTTG                                                                                                                 <  2:138238/148‑1                                          CAATTGATCATTCTCAGGTTCTCTACTCATGGAGAACACGAGATCATGACTATTGGTTCAACACACAACCATCCTGCCGATCTGGCCATCGACCCTTCGCTGCCAACGGCGGTAGGACTCCCCCTACAAAATGCCTCGTACGCCGTTGG                                                                                                                <  1:331844/149‑1                                          CAATTGATCATTCTCAGGTTCTCTACTCATGGAGAACACGAGATCATGACTATTGGTTCAACACACAACCATCCTGCCGATCTGGCCATCGACCCTTCGCTGCCAAC                                                                                                                                                          <  3:312051/107‑1                                          CAATTGATCATTCTCAGGTTCTCTACTCATGGAGAACACGAGATCATGACTATTGGTTCAACACACAACCATCCTGCCGATCTGGCCATCGACCCTTCGCTGCCAAC                                                                                                                                                          >  4:312051/1‑107                                             TTGATCATTCTCAGGTTCTCTACTCATGGAGAACACGAGATCATGACTATTGGTTCAACACACAACCATCCTGCCGATCTGGCCATCGACCCTTCGCTGCCAACGGCGGTAGGACTCCCCCTACAAAATGCCTCGTACGCCGTTGGCAG                                                                                                             <  4:107198/149‑1                                                                                 GAGATCATGACTATTGGTTCAACACACAACCATCCTGCCGATCTGGCCATCGACCCTTCGCTGCCAACG                                                                                                                                                         <  5:275259/69‑1                                                                                 GAGATCATGACTATTGGTTCAACACACAACCATCCTGCCGATCTGGCCATCGACCCTTCGCTGCCAACG                                                                                                                                                         >  6:275259/1‑69                                                                                                                                                 CAACGGCGGTAGGACTCCCCCTACAAAATGCCTCGTACGCCGTTGGCAGCGAAGGGTCGATGGCCAGATCGGCAGGATGGTTGTGTGTTGAACCAATAGTCATGATCTCGTGTTCTCCATGAGTAGAGAACCTGAGAATGATCAATTGC         <  4:208564/149‑1                                                                                                                                                  AACGGCGGTAGGACTCCGCCTACAAAATGCCTCGTACGCCGTTGGCAGCGAAGGGTCGATGGCCAGATCGGCAGGATGGTTGTGTGTTGAACCAATAGTCATGATCTCGTGTTCTCCAT                                      <  6:136768/119‑1                                                                                                                                                  AACGGCGGTAGGACTCCCCCTACAAAATGCCTCGTACGCCGTTGGCAGCGAAGGGTCGATGGCCAGATCGGCAGGATGGTTGTGTGTTGAACCAATAGTCATGATCTCGTGTTCTCCAT                                      >  5:136768/1‑119                                                                                                                                                  AACGGCGGTAGGACTCCCCCTACAAAATGCCTCGTACGACGTTGGCAGCGAAGGGTCGATGGACATATCGGCAGGATGGTTGTGTGTTGAACCAATAGTCATGATCTCGTGTTCTCCATGAGTAGAGAACCTGAGAATGATCAATTGC         >  1:240059/1‑148                                                                                                                                                     GGCGGTAGTACTCCCCCTACAAAATGCCTCGTACGCCGTTGGCAGCGAAGGGTCGATGGCCAGATCGGCAGGATGGTTGTGTGTTGAACCAATAGTCATGATCTCGTGTTCTCCATGAGTAGAGAACCTGAGAATGATCAATTGCAAGA     <  8:84022/149‑1                                                                                                                                                        GGTAGGACTCCCCCTACAAAATGCCTCGTACGCCGTTGGCAGCGAAGGGTCGATGGCCAGATCGGCAGGATGGTTGTGTGTTGAACCAATAGTCATGATCTCGTGTTCTCCATGAGTAGAGAACCTGAGAATGATCAATTGCAAGAGGC  <  6:199475/149‑1                                                                                                                                                                                                                                                                                                              GTGCCGGCAGGTGCTACATAGCAACCACTTCACGCCTCTTGCAATTGATCATTCTCAGGTTCTCTACTCATGGAGAACACGAGATCATGACTATTGGTTCAACACACAACCATCCTGCCGATCTGGCCATCGACCCTTCGCTGCCAACGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1332477‑1332628 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacggcgGTAGGACTCCCCCTACAAAATGCCTCGTACGCCGTTGGCAGCGAAGGGTCGATGGCCAGATCGGCAGGATGGTTGTGTGTTGAACCAATAGTCATGATCTCGTGTTCTCCATGAGTAGAGAACCTGAGAATGATCAATTGCAAGAGGC  <  NC_002947/1332657‑1332510

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.