| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1705453 = | 60 (0.940) | 4 (0.070) | 4/242 | NT | 7.0% | coding (818/1329 nt) | PP_1499 | hypothetical protein |
| ? | NC_002947 | 1705498 = | 49 (0.800) | coding (863/1329 nt) | PP_1499 | hypothetical protein | |||||
GGTAGGAGGCAAAGGCGATCACCTCCATGAGAATCGCCAGGCCCTCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1705500‑1705453‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctcctACCCCAGCCGCCTGCGCAAGCTCACCAACCGCACCCGTGCCATCCACATGGTCGAGGAGGGTGCAGACTTCATGCAGGTCTACGGTTTCTTCCGCGAGCAGGGCTTTGAGATGGCGCAGAGCTACAGCAACGCCAGCCGGGTGTTC > NC_002947/1705498‑1705643 GGTAGGAGGCAAAGGCGATCACCTCCATGAGAATCGCCAGGCCCTCCTACCCCAGCCGCCTGCGCAAGCTCACCAACCGCACGCGTGCCATCCACATGGTCGAGGAGGGTGCAGACTTCATGCAGGTCTACGGTTT < 5:76307/136‑1GGTAGGAGGCAAAGGCGATCACCTCCATGAGAATCGCCAGGCCCTCCTACCCCAGCCGCCTGCGCAAGCTCACCAACCGCACCCGTGCCATCCACATGGTCGAGGAGGGTGCAGACTTCATGCAGGTCTACGGTTT > 6:76307/1‑136 GTAGGAGGCAAAGGCGATCACCTCCATGAGAATCGCCAGGCCCTCCTACCCCAGCCGCCTGCGCAAGCTCACCAACCGCACCCGTGCCATCCACATGGTCGAGGAGGGTGCAGACTTCATGCAGGTCTACGGTTTCTTCCGCGAGCAGG > 5:365454/1‑149 GATCACCTCCATGAGAATCGCCAGGCCCTCCTACCCCAGCCGCCTGCGCAAGCTCACCAACCGCACCCGTGCCATCCACATGGTCGAGGAGGGTGCAGACTTCATGCAGGTCTACGGTTTCTTCCGCGAGCAGGGCTTTGAGATGGCGC < 6:365454/149‑1 TCCTACCCCAGCCGCCTGCGCAAGCTCACCAACCGCACCCGTGCCATCCACATGGTCGAGGAGGGTGCAGACTTCATGCAGGTCTACGGTTTCTTCCGCGAGCAGGGCTTTGAGATGGCGCAGAGCTACAGCAACGCCAGCCGGGTGTT > 1:317770/1‑149 TCCTACCCCAGCCGCCTGCGCAAGCTCACCAACCGCACCCGTGCCATCCACATGGTCGAGGAGGGTGCAGACTTCATGCAGGTCTACGGTT > 1:113810/1‑91 TCCTACCCCAGCCGCCTGCGCAAGCTCACCAACCGCACCCGTGCCATCCACATGGTCGAGGAGGGTGCAGACTTCATGCAGGTCTACGGTT < 2:113810/91‑1 CCTACCCCAGCCGCCTGCGCAAGCTCACCAACCGCACCCGTGCCATCCACATGGTCGAGGAGGGTGCAGACTTCATGCAGGTCTACGGTTTCTTCCGCGAGCAGGGCTTTGAGATGGCGCAGAGCTACAGCAACGCCAGCCGGGTGTTC > 5:232299/1‑149 CTACCCCAGCCGCCTGCGCAAGCTCACCAACCGCACCCGTGCCATCCACATGGTCGAGGAGGGTGCAGACTTCATGCAGGTCTACGGTTTCTTCCGCGAGCAGGGCTTTGAGATGGCGCAGAGCTACAGCAACGCCAGCCGGGTGTTC < 3:246021/148‑1 GGTAGGAGGCAAAGGCGATCACCTCCATGAGAATCGCCAGGCCCTCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1705500‑1705453‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctcctACCCCAGCCGCCTGCGCAAGCTCACCAACCGCACCCGTGCCATCCACATGGTCGAGGAGGGTGCAGACTTCATGCAGGTCTACGGTTTCTTCCGCGAGCAGGGCTTTGAGATGGCGCAGAGCTACAGCAACGCCAGCCGGGTGTTC > NC_002947/1705498‑1705643 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |