New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1714475 | 63 (0.980) | 4 (0.070) | 4/234 | NT | 6.1% | coding (319/870 nt) | PP_1509 | hypothetical protein |
? | NC_002947 | = 1714500 | 65 (1.100) | coding (344/870 nt) | PP_1509 | hypothetical protein |
CCCGCTCCCGGCACCATTGCCCGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1714319‑1714475 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggccggcAACTGCAGCCAGTAGGGTGATACGCGCCGGCCCAGCGGGGCCATCAGCCGGGTGAAGTCGAAGGCAGGCTCAAGCTGGTCTCGCAGGTCGCCTTCATGGCTGACATCCCGCGGAAACTTGGCAGTGAAGCGAAAGTGCTCGGGCATGA < NC_002947/1714500‑1714353 CCCGCTCCCGGCACCATTGCCCGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCT > 7:200031/1‑149 CCGCTCCCGGCACCATTGCCCGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTG < 2:221242/149‑1 CCGCTCCCGGCACCATTGCCCGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTG > 2:356443/1‑149 GCTCCCGGCACCATTGCCCGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGG < 4:61465/149‑1 CCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCAACTGCAGCCAGTAGGGTGATACGCGCCGG < 3:229303/148‑1 CCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCAACTGCAGCCAGTAGGGTGATACGCGCCGGCC < 6:156887/149‑1 GAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGCCTTCACCCGGCTGATGGCCCCGCTGGGCCGGCAACTGCAGCCAGTAGGGTGATACGCGCCGGCCCA < 5:296103/149‑1 CTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCAACTGCAGCCAGTAGGGTGATACGCGCCGGCCCAGCGGG < 6:336/149‑1 CAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGG < 7:204212/71‑1 CAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGG > 8:204212/1‑71 GCCGGCAACTGCAGCCAGTAGGGTGATACGCGCCGGCCCAGCGGGGCCATCAGCCGGGTGAAGTCGAAGGCAGGCTCAAGCTGGTCTCGCAGGTCGCCTTCATGGCTGACATCCCGCGGAAACTTGGCAGTGAAGCGAAAGTGCTCGGG > 8:200031/1‑149 CCGGCAACTGCAGCCAGTAGGGTGATACGCGCCGGCCCAGCGGGGCCATCAGCCGGGTGAAGTCGAAGGCAGGCTCAAGCTGGTCTCGCAGGACGCCTTCATGGCTGACATCCCGCGGAAACTTGGCAGTGAAGCGAAAGTGCTCGGGC < 3:76979/149‑1 GCAACTGCAGCCAGTAGGGTGATACGCGCCGGCCCAGCGGGGCCATCAGCCGGGTGAAGTCGAAGGCAGGCTCAAGCTGGTCTCGCAGGTCGCCTTCATGGCTGACATCCCGCGGAAACTTGGCAGTGAAGCGAAAGTGCTCGTGCATG < 4:90784/149‑1 CAACTGCAGCCAGTAGGGTGATACGCGCCGGCCCAGCGGGGCCATCAGCCGGGTGAAGTCGAAGGCAGGCTCAAGCTGGTCTCGCAGGTCGCCTTCATGGCTGACATCCCGCGGAAACTTGGCAGTGAAGCGAAAGTGCTCGGGCATGA < 6:85735/149‑1 CCCGCTCCCGGCACCATTGCCCGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1714319‑1714475 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggccggcAACTGCAGCCAGTAGGGTGATACGCGCCGGCCCAGCGGGGCCATCAGCCGGGTGAAGTCGAAGGCAGGCTCAAGCTGGTCTCGCAGGTCGCCTTCATGGCTGACATCCCGCGGAAACTTGGCAGTGAAGCGAAAGTGCTCGGGCATGA < NC_002947/1714500‑1714353 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |