New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 171447563 (0.980)4 (0.070) 4/234 NT 6.1% coding (319/870 nt) PP_1509 hypothetical protein
?NC_002947 = 1714500 65 (1.100)coding (344/870 nt) PP_1509 hypothetical protein

CCCGCTCCCGGCACCATTGCCCGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1714319‑1714475
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggccggcAACTGCAGCCAGTAGGGTGATACGCGCCGGCCCAGCGGGGCCATCAGCCGGGTGAAGTCGAAGGCAGGCTCAAGCTGGTCTCGCAGGTCGCCTTCATGGCTGACATCCCGCGGAAACTTGGCAGTGAAGCGAAAGTGCTCGGGCATGA  <  NC_002947/1714500‑1714353
                                                                                                                                                                                                                                                                                                                 
CCCGCTCCCGGCACCATTGCCCGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCT                                                                                                                                                              >  7:200031/1‑149
 CCGCTCCCGGCACCATTGCCCGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTG                                                                                                                                                             <  2:221242/149‑1
 CCGCTCCCGGCACCATTGCCCGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTG                                                                                                                                                             >  2:356443/1‑149
   GCTCCCGGCACCATTGCCCGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGG                                                                                                                                                           <  4:61465/149‑1
                                       CCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCAACTGCAGCCAGTAGGGTGATACGCGCCGG                                                                                                                        <  3:229303/148‑1
                                        CCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCAACTGCAGCCAGTAGGGTGATACGCGCCGGCC                                                                                                                      <  6:156887/149‑1
                                          GAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGCCTTCACCCGGCTGATGGCCCCGCTGGGCCGGCAACTGCAGCCAGTAGGGTGATACGCGCCGGCCCA                                                                                                                    <  5:296103/149‑1
                                               CTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCAACTGCAGCCAGTAGGGTGATACGCGCCGGCCCAGCGGG                                                                                                               <  6:336/149‑1
                                                                                CAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGG                                                                                                                                                            <  7:204212/71‑1
                                                                                CAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGG                                                                                                                                                            >  8:204212/1‑71
                                                                                                                                                       GCCGGCAACTGCAGCCAGTAGGGTGATACGCGCCGGCCCAGCGGGGCCATCAGCCGGGTGAAGTCGAAGGCAGGCTCAAGCTGGTCTCGCAGGTCGCCTTCATGGCTGACATCCCGCGGAAACTTGGCAGTGAAGCGAAAGTGCTCGGG       >  8:200031/1‑149
                                                                                                                                                        CCGGCAACTGCAGCCAGTAGGGTGATACGCGCCGGCCCAGCGGGGCCATCAGCCGGGTGAAGTCGAAGGCAGGCTCAAGCTGGTCTCGCAGGACGCCTTCATGGCTGACATCCCGCGGAAACTTGGCAGTGAAGCGAAAGTGCTCGGGC      <  3:76979/149‑1
                                                                                                                                                           GCAACTGCAGCCAGTAGGGTGATACGCGCCGGCCCAGCGGGGCCATCAGCCGGGTGAAGTCGAAGGCAGGCTCAAGCTGGTCTCGCAGGTCGCCTTCATGGCTGACATCCCGCGGAAACTTGGCAGTGAAGCGAAAGTGCTCGTGCATG   <  4:90784/149‑1
                                                                                                                                                            CAACTGCAGCCAGTAGGGTGATACGCGCCGGCCCAGCGGGGCCATCAGCCGGGTGAAGTCGAAGGCAGGCTCAAGCTGGTCTCGCAGGTCGCCTTCATGGCTGACATCCCGCGGAAACTTGGCAGTGAAGCGAAAGTGCTCGGGCATGA  <  6:85735/149‑1
                                                                                                                                                                                                                                                                                                                 
CCCGCTCCCGGCACCATTGCCCGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1714319‑1714475
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggccggcAACTGCAGCCAGTAGGGTGATACGCGCCGGCCCAGCGGGGCCATCAGCCGGGTGAAGTCGAAGGCAGGCTCAAGCTGGTCTCGCAGGTCGCCTTCATGGCTGACATCCCGCGGAAACTTGGCAGTGAAGCGAAAGTGCTCGGGCATGA  <  NC_002947/1714500‑1714353

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.