New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1752726	54 (0.840)	3 (0.050)	3/242	NT	5.2%	coding (133/423 nt)	PP_1554	hypothetical protein
	?	NC_002947	= 1752754	57 (0.940)					coding (161/423 nt)	PP_1554	hypothetical protein

AACGAGGGGGTTCTGGTCGAATGACCAATCAGCGCCCCCCGTTTCGTAACCCGGCCCGCGCCAAGCCCGTCGACCGGGAAGGGCAGGAGCAGGCTGCCCTGCTCGAAGAGATTCAGCTGCGCTATCCGGATGTGTACGAGCTGATCTGCCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1752574‑1752726 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacgCCCTTGTGCCGATGGCCGCCATTCGGGACGTGGCAGATCAGCTCGTACACATCCGGATAGCGCAGCTGAATCTCTTCGAGCAGGGCAGCCTGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGGCCGGGTTACGAAACGGGGGGC  <  NC_002947/1752754‑1752607                                                                                                                                                                                                                                                                                                               AACGAGGGGGTTCTGGTCGAATGACCAATCAGCGCCCCCCGTTTCGTAACCCGGCCCGCGCCAAGCCCGTCGACCGGGAAGGGCAGGAGCAGGCTGCCCTGCTCGAAGAGATTCAGCTGCGCTATCCGGATGTGTACGAGCTGATCTGC                                                                                                                                                          >  3:126213/1‑149    GAGGGGGTTCTGGTCGAATGACCAATCAGCGCCCCCCGTTTCGTAACCCGGCCCGCGCCAAGCCCGTCGACCGGGAAGGGCAGGAGCAGGCTGCCCTGCTCGAAGAGATTCAGCTGCGCTATCCGGATGTGTACGAGCTGATCTGCCAC                                                                                                                                                       >  6:59982/1‑149                                      CCCGTTTCGTAACCCGGCCCGCGCCAAGCCCGTCGACCGGGAAGGGCAGGAGCAGGCTGCCCTGCTCGAAGAGATTCAGCTGCGCTATCCGGATGTGTACGAGCTGATCTGCCACGCCCTTGTGCCGATGGCCGCCATTCGGGACGTGG                                                                                                                     >  3:109878/1‑149                                       CCGTTTCGTAACCCGGCCCGCGCCAAGCCCGTCGACCGGGAAGGGCAGGAGCAGGCTGCCCTGCTCGAAGAGATTCAGCTGCGCTATCCGGATGTGTACGAGCTGATCTGCCACGCCCTTGTGCCGATGGCCGCCATTCGGGACGTGGC                                                                                                                    <  5:13335/149‑1                                        CGTTTCGTAACCCGGCCCGCGCCAAGCCCGTCGACCGGGAAGGGCAGGAGCAGGCTGCCCTGCTCGAAGAGATTCAGCTGCGCTATCCGGATGTGTACGAGCTGATCTGCCACGCCCTTGTGCCGATGGCCGCCATTCGGGACGTGGCA                                                                                                                   <  4:109878/149‑1                                                                                                                                                    GCCACGCCCTTGTGCCGATGGCCGCCATTCGGGACGTGGCAGATCAGCTCGTACACATCCGGATAGCGCAGCTGAATCTCTTCGAGCAGGGCAGCCTGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGGCCGGGTTACGAAACGG       >  5:106227/1‑149                                                                                                                                                    GCCACGCCCTTGTGCCGATGGCCGCCATTCGGGACGTGGCAGATCAGCTCGTACACATCCGGATAGCGCAGCTGAATCTCTTCGAGCAGGGCAGCCTGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGGCCGGGTTACGAAACGG       <  5:289741/149‑1                                                                                                                                                    GCCACGCCCTTGTGCCGATGGCCGCCATTCGGGACGTGGCAGATCAGCTCGTACACATCCGGATAGCGCAGCTGAATCTCTTCGAGCAGGGCAGCCTGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGGCCGGGTTACGAAACGG       <  6:106227/149‑1                                                                                                                                                       ACGCCCTTGTGCCGATGGCCGCCATTCGGGACGTGGCAGATCAGCTCGTACACATCCGGATAGCGCAGCTGAATCTCTTCGAGCAGGGCAGCCTGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGGCCGGGTTACGAAACGGGGG    <  3:9500/149‑1                                                                                                                                                         GCCCTTGTGCCGATGGCCGCCATTCGGGACGTGGCAGATCAGCTCGTACACATCCGGATAGCGCAGCTGAATCTCTTCGAGCAGGGCAGCCTGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGGCCGGGTTACGAAACGGGGGGC  >  3:73626/1‑149                                                                                                                                                                                                                                                                                                               AACGAGGGGGTTCTGGTCGAATGACCAATCAGCGCCCCCCGTTTCGTAACCCGGCCCGCGCCAAGCCCGTCGACCGGGAAGGGCAGGAGCAGGCTGCCCTGCTCGAAGAGATTCAGCTGCGCTATCCGGATGTGTACGAGCTGATCTGCCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1752574‑1752726 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacgCCCTTGTGCCGATGGCCGCCATTCGGGACGTGGCAGATCAGCTCGTACACATCCGGATAGCGCAGCTGAATCTCTTCGAGCAGGGCAGCCTGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGGCCGGGTTACGAAACGGGGGGC  <  NC_002947/1752754‑1752607

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.