| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1787485 = | 66 (1.030) | 3 (0.050) | 3/246 | NT | 5.1% | coding (271/744 nt) | pyrH | uridylate kinase |
| ? | NC_002947 | 1787530 = | 48 (0.770) | coding (316/744 nt) | pyrH | uridylate kinase | |||||
CCGGCGGAGAAAATTACCACATCCCCGGAGTTGAGGTGACGAATAGCTTTGCGGCGATCGTAATGATCGGTGACACCCACCATGGAAATGGCCGACATGACCAGGGCCGGGATGTTCGAGCGCTCCAGCGCATCGCGCATGGCCAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1787633‑1787485‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccCTGGTCATGTCGGCCATTTCCATGGTGGGTGTCACCGATCATTACGATCGCCGCAAAGCTATTCGTCACCTCAACTCCGGGGATGTGGTAATTTTCTCCGCCGGTACCGGCAACCCGTTCTTCACCACCGACTCCGCGGCCTGCCT > NC_002947/1787530‑1787675 CCGGCGGAGAAAATTACCACATCCCCGGAGTTGAGGTGACGAATAGCTTTGCGGCGATCGTAATGATCGGTGACACCCACCATGGAAATGGCCGACATGACCAGGGCCGGGATGTTCGAGCGCTCCAGCGCATCGCGCATGGCCAGGCC > 8:315506/1‑149 TGACCAGGGCCGGGATGTTCGAGCGCTCCAGCGCATCGCGCATGGCCAGGCCCTGGTCATGTCGGCCATTTCCATGGTGGGTGTCACTGATCATTACGATCGCCGCAAAGCTATTCGTCACCTCAACTCCGGGGATGTGGTAATTTTCT > 3:371022/1‑149 GGGCCGGGATGTTCGAGCGCTCCAGCTCATCGCGCATGGCCAGGCCCTGGTCATGTCGGCCATTTCCATGGTGGGTGTCACCGATCATTACGATCGCCGCTAAGCTATTCGTCACCTCAACTCCGGGGATGTGGTAATTTTCTCCG < 1:34451/146‑1 GGGCCGGGATGTTCGAGCGCTCCAGCGCATCGCGCATGGCCAGGCCCTGGTCATGTCGGACATTTCCATGGTGGGTGTCACCGATCATTACGATCGCCGCAAAGCTATTCCTCACCTCAACTCCGGGGATGTGGAAATTATCTCag > 2:34451/1‑144 GGCCCTGGTCATGTCGGCCATTTCCATGGTGGGTGTCACCGATCATTACGATCGCCGCAAAGCTATTCGTCACCTCAACTCCGGGGATGTGGTAATTTTCTCCGCCGGTACCGGCAACCCGTTCTTCACCACCGACTCCGCGGCCTGCC > 1:242616/1‑149 GCCCTGGTCATGTCGGCCATTTCCATGGTGGGTGTCACCGATCATTACGATCGCCGCAAAGCTATTCGTCACCTCAACTCCGGGGATGTGGTAATTTTCTCCGCCGGTACCGGCAACCCGTTCTTCACCACCGACTCCGCGGCCTGCCT < 8:191899/149‑1 CCGGCGGAGAAAATTACCACATCCCCGGAGTTGAGGTGACGAATAGCTTTGCGGCGATCGTAATGATCGGTGACACCCACCATGGAAATGGCCGACATGACCAGGGCCGGGATGTTCGAGCGCTCCAGCGCATCGCGCATGGCCAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1787633‑1787485‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccCTGGTCATGTCGGCCATTTCCATGGTGGGTGTCACCGATCATTACGATCGCCGCAAAGCTATTCGTCACCTCAACTCCGGGGATGTGGTAATTTTCTCCGCCGGTACCGGCAACCCGTTCTTCACCACCGACTCCGCGGCCTGCCT > NC_002947/1787530‑1787675 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |