| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1873354 = | 63 (0.980) | 4 (0.070) | 4/242 | NT | 6.6% | coding (183/522 nt) | cobP | adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase |
| ? | NC_002947 | 1873401 = | 53 (0.870) | coding (230/522 nt) | cobP | adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase | |||||
CAGGCACGCCAGCAGGGCATCACGCTCCTCGGCCAGGCGCTGGTCATCTTCCAGCATCAACAAATTGGTCAGCCACAGGGTCAGGCAATCCACGAGCAGGCAGCGCCCTTCGGCCGCTTCGGCGCGCAGTACCGCGGCCAGGGCCAAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1873504‑1873354‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagggcGCTGCCTGCTCGTGGATTGCCTGACCCTGTGGCTGACCAATTTGTTGATGCTGGAAGATGACCAGCGCCTGGCCGAGGAGCGTGATGCCCTGCTGGCGTGCCTGGAACAGTTACCTGGCACCCTTATCCTGGTCAGTAACGAAA > NC_002947/1873401‑1873544 CAGGCACGCCAGCAGGGCATCACGCTCCTCGGCCAGGCGCTGGTCATCTTCCAGCATCAACAAATTGGTCAGCCACAGGGTCAGGCAATCCACGAGCAGGCAGCGCCCTTCGGCCGCTTCGGCGCGCAGTACCGCGGCCAGGGCCAAGG > 2:231736/1‑149CAGGCACGCCAGCAGGGCATCACGCTCCTCGGCCAGGCGCTGGTCATCTTCCAGCATCAACAAATTGGTCAGCCACAGGGTCAGGCAATCCACGAGCAGGCAGCGCCCTTCGGCCGCTTCGGCGCGCAGTACCGCGGCCAGGGCCAAGG > 4:387209/1‑149 CAGCGCCCTTCGGCCGCTTCGGCGCGCAGTACCGCGGCCAGGGCCAAGGGCGCTGCCTGCTCGTGGATTGCCTGACCCTGTGGCTGACCAATTTGTTGATGCTGGAAGATGACCAGCGCCTGGCCGAGGAGCGTGATGCCCTGCTGGCG > 4:1608/1‑149 AGCGCCCTTCGGCCGCTTCGGCGCGCAGTACCGCGGCCAGGGCCAAGGGCGCTGCCTGCTAGTGGATTGCCTGACCCTGTGGCTGACCAATTTGTTGATGCTGGAAGATGACCAGCGCCTGGCCGAGGAGCGTGATGCCCTGCTtgagt > 4:239718/1‑144 CCTTCGGCCGCTTCGGCGCGCAGTACCGCGGCCAGGGCCAAGGGCGCTGCCTGCTCGTGGATTGCCTGACCCTGTGGCTGACCAATTTGTTGATGCTGGAAGATGACCAGCGCCTGGCCGAGGAGCGTGATGCCCTGCTGGCGTGCCTG > 3:88783/1‑149 CCTTCGGCCGCTTCGGCGCGCAGTACCGCGGCCAGGGCCAAGGGCGCTGCCTGCTCGTGGATTGCCTGACCCTGTGGCTGACCAATTTGTTGATGCTGGAAGATGACCAGCGCCTGGCCGAGGAGCGTGATGCCCTGCTGGCGTGCCTG < 4:88783/149‑1 AAGGGCGCTGCCTGCTCGTGGATTGCCTGACCCTGTGGCTGACCAATTTGTTGATGCTGGAAGATGACCAGCGCCTGGCCGAGGAGCGTGATGCCCTGCTGGCGTGCCTGGAACAGTTACCTGGCACC > 3:178164/1‑128 AAGGGCGCTGCCTGCTCGTGGATTGCCTGACCCTGTGGCTGACCAATTTGTTGATGCTGGAAGATGACCAGCGCCTGGCCGAGGAGCGTGATGCCCTGCTGGCGTGCCTGGAACAGTTACCTGGCACC < 4:178164/128‑1 AGGGCGCTGCCTGCTCGTGGATTGCCTGCCCCTGTGGCTGACCAATTTGTTGATGCTGGAAGATGACCAGCGCCTGGCCGAGGAGCGTGATGCCCTGCTGGCGTGCCTGGAACAGTTACCTGGCACCCTTATCCTGGTCAGTAACGAAA > 1:361310/1‑149 AGGGCGCTGCCTGCTCGTGGATTGCCTGACCCTGTGGCTGACCAATTTGTTGATGCTGGAAGATGACCAGCGCCTGGCCGAGGAGCGTGATGCCCTGCTGGCGTGCCTGGAACAGTTACCTGGCACCCTTATCCTGGTCAGTAACGAAA > 8:113367/1‑149 CAGGCACGCCAGCAGGGCATCACGCTCCTCGGCCAGGCGCTGGTCATCTTCCAGCATCAACAAATTGGTCAGCCACAGGGTCAGGCAATCCACGAGCAGGCAGCGCCCTTCGGCCGCTTCGGCGCGCAGTACCGCGGCCAGGGCCAAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1873504‑1873354‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagggcGCTGCCTGCTCGTGGATTGCCTGACCCTGTGGCTGACCAATTTGTTGATGCTGGAAGATGACCAGCGCCTGGCCGAGGAGCGTGATGCCCTGCTGGCGTGCCTGGAACAGTTACCTGGCACCCTTATCCTGGTCAGTAACGAAA > NC_002947/1873401‑1873544 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |