| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1874240 = | 66 (1.030) | 6 (0.100) | 4/238 | NT | 8.6% | coding (551/1056 nt) | cobU | nicotinate‑nucleotide‑‑dimethylbenzimidazole phosphoribosyltransferase |
| ? | NC_002947 | 1874333 = | 65 (1.080) | coding (644/1056 nt) | cobU | nicotinate‑nucleotide‑‑dimethylbenzimidazole phosphoribosyltransferase | |||||
GACTTCAGCCTTGTGCTGCACGCCGGCGTTGTCCAGGCCGGTGCCAGGGCCGCTCAGCTCCGATGCCGGACAACCCAGCAGAACGCTGGCCAAGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1874337‑1874240‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaggctgAAGTCATCGAGAGGGCGCTGCGCCTGCATGGCCTGCGTGCTGAAGACCCGTTGCAGGCACTGGCTTGTGTTGGCGGTTTCGAGATCGCGGCGTTGGCGGGGGCCTACCTCGGTTGCGCGCAGGCGGGTGTCACGGTGCTGGTGGATG > NC_002947/1874333‑1874479 GACTTCAGCCTTGTGCTGCACGCCGGCGTTGTCCAGGCCGGTGCCAGGGCCGCTCAGCTCCGATGCCGGACAACCCAGCAGAACGCTGGCCAAGGCTGAAGTCATCGAGAGGGCGCTGCGCCTGCATGGCCTGCGTGCTGAAGACCCGT > 4:293612/1‑149GACTTCAGCCTTGTGCTGCACGCCGGCGTTGTCCAGGCCGGTGCCAGGGCCGCTCAGCTCCGATGCCGGACAACCCAGCAGAACGCTGGCCAAGGCTGAAGTCATCGAGAGGGCGCTGCGCCTGCATGGCCTGCGTGCTGAAGACCCGT > 4:298969/1‑149 CTTCAGCCTTGTGCTGCACGCCGGCGTTGTCCAGGCCGGTGCCAGGGCCGCTCAGCTCCGATGCCGGACAACCCAGCAGAACGCTGGCCAAGGCTGAAGTCATCGAGAGGGCGCTGCGCCTGCATGGCCTGCGTGCTGAA < 5:54530/140‑1 CTTCAGCCTTGTGCTGCACGCCGGCGTTGTCCAGGCCGGTGCCAGGGCCGCTCAGCTCCGATGCCGGACAACCCAGCAGAACGCTGGCCAAGGCTGAAGTCATCGAGAGGGCGCTGCGCCTGCATGGCCTGCGTGCTGAA > 6:54530/1‑140 GTCCAGGCCGGTGCCAGGGCCGCTCAGCTCCGATGCCGGACAACCCAGCAGAACGCTGGCCAAGGCTGAAGTCATCGAGAGGGCGCTGCGCCTGCATGGCCTGCGTGCTGAAGACCCGTTGCAGGCACTGGCTTGTGTTGGCGGTTTC < 3:293612/148‑1 GTCCAGGCCGGTGCCAGGGCCGCTCAGCTCCGATGCCGGACAACCCAGCAGAACGCTGGCCAAGGCTGAAGTCATCGAGAGGGCGCTGCGCCTGCATGGCCTGCGTGCTGAAGACCCGTTGCAGGCACTGGCTTGTGTTGGCGGTTTC < 3:298969/148‑1 CAAGGCTGAAGTCATCGAGAGGGCGCTGCGCCTGCATGGCCTGCGTGCTGAAGACCCGTTGCAGGCACTGGCTTGTGTTGGCGGTTTCGAGATCGCGGCGTTGGCGGGGGCCTACCTCGGTTGCGCGCAGGCGGGTGTCACGGTGCTGG > 2:167184/1‑149 CAAGGCTGAAGTCATCGAGAGGGCGCTGCGCCTGCATGGCCTGCGTGCTGAAGACCCGTTGCAGGCACTGGCTTGTGTTGGCGGTTTCGAGATCGCGGCGTTGGCGGGGGCCTACCTCGGTTGCGCGCAGGCGGGTGTCACGGTGCTG < 5:323047/148‑1 CAAGGCTGAAGTCATCGAGAGGGCGCTGCGCCTGCATGGCCTGCGTGCTGAAGACCCGTTGCAGGCACTGGCTTGTGTTGGCGGTTTCGAGATCGCGGCGTTGGCGGGGGCCTACCTCGGTTGCGCGCAGGCGGGTGTCACGGTGCTG > 6:323047/1‑148 AAGGCTGAAGTCATCGAGAGGGCGCTGCGCCTGCATGGCCTGCGTGCTGAAGACCCGTTGCAGGCACTGGCTTGTGTTGGCGGTTTCGAGATCGCGGCGTTGGCGGGGGCCTACCTCGGTTGCGCGCAGGCGGGTGTCACGGTGCTGGT < 4:46068/149‑1 TGAAGTAATCGAGAGGGCGCTGCGCCTGCATGGCCTCCGTGCTGAAGACCCGTTGCAGGCACTGGCTTGTGTTGGCGGTTTCGAGATCGCGGCGTTGGCGGGGGCCTACCTCGGTTCCGCGCAGGCGGGTGTCACTGAGCAGGTGGATG > 8:265192/1‑149 GACTTCAGCCTTGTGCTGCACGCCGGCGTTGTCCAGGCCGGTGCCAGGGCCGCTCAGCTCCGATGCCGGACAACCCAGCAGAACGCTGGCCAAGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1874337‑1874240‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaggctgAAGTCATCGAGAGGGCGCTGCGCCTGCATGGCCTGCGTGCTGAAGACCCGTTGCAGGCACTGGCTTGTGTTGGCGGTTTCGAGATCGCGGCGTTGGCGGGGGCCTACCTCGGTTGCGCGCAGGCGGGTGTCACGGTGCTGGTGGATG > NC_002947/1874333‑1874479 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |