| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2095628 = | 55 (0.860) | 4 (0.070) | 4/238 | NT | 7.0% | coding (850/1212 nt) | alaA | glutamate‑pyruvate aminotransferase |
| ? | NC_002947 | 2095675 = | 54 (0.900) | coding (803/1212 nt) | alaA | glutamate‑pyruvate aminotransferase | |||||
TGACCTTCAACGGCTTGTCCAAGTCGTACCGGGTGGCGGGCTTCCGCTCTGGCTGGCTGATCATTTCCGGGCCCAAGCACCACGCACACAGCTACATCGAAGGCATCGACATGCTGGCCAACATGCGCCTGTGCGCCAACGTGCCGGCCCAGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2095783‑2095628‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcatgTCGATGCCTTCGATGTAGCTGTGTGCGTGGTGCTTGGGCCCGGAAATGATCAGCCAGCCAGAGCGGAAGCCCGCCACCCGGTACGACTTGGACAAGCCGTTGAAGGTCAGGCACAGCAGGTCCGGAGCCAGCGAGGCGGTGCT > NC_002947/2095675‑2095817 TGACCTTCAACGGCTTGTCCAAGTCGTGCCGGGTGGCGGGCTTCCGCTCTGGCTGGCTGATCATTTCCGGGCCCAAGCACCACGCACACAGCTACATCGAAGGCATCGACATGCTGGCCAACATGCGCCTGTGCGCCAACGTGCCGGCC > 6:22634/1‑149 ACCTTCAACGGCTTGTCCAAGTCGTACCGGGTGGCGGGCTTCCGCTCTGGCTGGCTGATCATTTCCGGGCCCAAGCACCACGCACACAGCTACATCGAAGGCATCGACATGCTGGCCAACATGCGCCTGTGCGCCAACGTGCCGGCC < 4:405591/147‑1 CTTCAACGGCTTGTCCAAGTCGTACCGGGTGGCGGGCTTCCGCTCTGGCTGGCTGATCATTTCCGGGCCCAAGCACCACGCACACAGCTACATCGAAGGCATCGACATGCTGGCCAACATGCGCCTGTGCGCCAACGTGCCGGCCCAG > 7:258918/1‑148 CAACGGCTTGTCCAAGTCGTACCGGGTGGCGGGCTTCCGCTCTGGCTGGCTGATCATTTCCGGGCCCAAGCACCACGCACACAGCTACATCGAAGGCATCGACATGCTGGCCAACATGCGCCTGTGCGCCAACGTGCCGGCCCAGCAT < 7:362584/148‑1 TCGACATGCTGGCCAACATGCGCCTGTGCGCCAACGTGCCGGCCCAGCATGTCGATGCCTTCGATGTAGCTGTGTGCGTGGTGCTTGGGCCCGGAAATGATCAGCCAGCCAGAGCGGAAGCCCGCCACCCGGTACGACTTGGACAAGCC > 2:343786/1‑149 ACATGCTGGCCAACATGCGCCTGTGCGCCAACGTGCCGGCCCAGCATGTCGATGCCTTCGATGTAGCTGTGTGCGTGGTGCTTGGGCCCGGAAATGATCAGCCAGCCAGAGCGGAAGCCCGCCACCCGGTACGACTTGGACAAGCAGTT > 6:255947/1‑149 CTGGCCATCATGTGCCTGTGCGCCAACGTGCCGGCCCAGCATGTCGATGCCTTCGATGTAGCTGTGTGCGTGGTGCTTGGGCCCGGAAATGATCAGCCAGCCAGAGCGGAAGCCCGCCACCCGGTACGACTTGGACAAGCCGTTGAAGG < 1:343786/149‑1 CGTGCCGGCCCAGCATGTCGATGCCTTCGATGTAGCTGTGTGCGTGGTGCTTGGGCCCGGAAATGATCAGCCAGCCAGAGCGGAAGCCCGCCACCCGGTACGACTTGGACAAGCCGTTGAAGGTCAGGCACAGCAGGTCCGGAGCCAGC < 5:255947/149‑1 CCAGCATGTCGATGCCTTCGATGTAGCTGTGTGCGTGGTGCTTGGGCCCGGAAATGATCAGCCAGCCAGAGCGGAAGCCCGCCACCCGGTACGACTTGGACAAGCCGTTGAAGGTCAGGCACAGCAGGTCCGGAGCCAGCGAGGCGGTG > 8:53982/1‑149 AGCATGTCGATGCCTTCGATGTAGCTGTGTGCGTGGTGCTTGGGCCCGGAAATGATCTGCCAGCCAGAGCGGAAGCCCGCCACCCGGTACGACTTGGACAAGCCGTTGAAGGTCAGGCACAGCAGGTCCGGAGCCAGCGAGGCGGTGCT < 3:21100/149‑1 AGCATGTCGATGCCTTCGATGTAGCTGTGTGCGTGGTGCTTGGGCCCGGAAATGATCAGCCAGCCAGAGCGGAAGCCCGCCACCCGGTACGACTTGGACAAGCCGTTGAAGGTCAGGCACAGCAGGTCCGGAGCCAGCGAGTCGGTGCT > 8:138485/1‑149 TGACCTTCAACGGCTTGTCCAAGTCGTACCGGGTGGCGGGCTTCCGCTCTGGCTGGCTGATCATTTCCGGGCCCAAGCACCACGCACACAGCTACATCGAAGGCATCGACATGCTGGCCAACATGCGCCTGTGCGCCAACGTGCCGGCCCAGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2095783‑2095628‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcatgTCGATGCCTTCGATGTAGCTGTGTGCGTGGTGCTTGGGCCCGGAAATGATCAGCCAGCCAGAGCGGAAGCCCGCCACCCGGTACGACTTGGACAAGCCGTTGAAGGTCAGGCACAGCAGGTCCGGAGCCAGCGAGGCGGTGCT > NC_002947/2095675‑2095817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |