| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2638887 | 63 (0.980) | 4 (0.070) | 4/240 | NT | 6.4% | coding (216/369 nt) | PP_2309 | hypothetical protein |
| ? | NC_002947 | = 2638930 | 58 (0.960) | coding (173/369 nt) | PP_2309 | hypothetical protein | |||||
CTCAGTGCCGGTGCTTGTGCCGCTCCCGCCAGGCCCTCCACCAGGCCCCGCTCACCACAAAGCGCGGAAAGGTGATGAACTGCTCGGTCAGTAAGCGCTGCACGGCATCCTGGCGGTTGGCGAACGGTTCGGGTTGCTGGGCTTCAAGGCGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2638733‑2638887‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggtggGTGTGATTGCCTTGATCGCAGCGTTGGGCCTGCAGCGCCAAGGCCACCGCCTTGAAGCCCAGCAACCCGAACCGTTCGCCAACCGCCAGGATGCCGTGCAGCGCTTACTGACCGAGCAGTTCATCACCTTTCCGCGCTTTGTGGTG < NC_002947/2638930‑2638785 CTCAGTGCCGGTGCTTGTGCCGCTCCCGCCAGGCCCTCCACCAGGCCCCGCTCACCACAAAGCGCGGAAAGGTGATGAACTGCTCGGTCAGTAAGCGCTGCACGGCATCCTGGCGGTTGGCGAACGGTTCGGGTTGCTGGGCTTCAAGG < 6:352753/149‑1CTCAGTGCCGGTGCTTGTGCCGCTCCCGCCAGGCCCTCCACCAGGCCCCGCTCACCACAAAGCGCGGAAAGGTGATGAACTGCTCGGTCAGTAAGCGCTGCACGGCATCCTGGCGGTTGGCGAACGGTTCGGGTTGCTGGGCTTCAAGG < 7:173672/149‑1 CCGGTGCTTGTGCCGCTCCCGCCAGGCCCTCCACCAGGCCCCGCTCACCACAAAGCGCGGAAAGGTGATGAACTGCTCGGTCAGTAAGCGCTGCACGGCATCCTGGCGGTTGGCGGACGGTTCGGGTTGCTGGGCTTCAAGGCGGTGG < 4:92262/148‑1 TTGTGCCGCTCCCGCCAGGCCCTCCACCAGGCCCCGCTCACCACAAAGCGCGGAAAGGTGATGAACTGCTCGGTCAGTAAGCGCTGCACGGCATCCTGGCGGTTGGCGAACGGTTCGGGTTGCTCGGCTTCAAGGCGGTGGGTGTGATT > 6:293639/1‑149 GCCCCGCTCACCACAAAGCGCGGAAAGGTGATGAACTGCTCGGTCAGTAAGCGCTGCACGGCATCCTGGCGGTTGGCGAACGGTTCGGGTTGCTGGGCTTCAAGGCGGTG < 5:139549/110‑1 GCCCCGCTCACCACAAAGCGCGGAAAGGTGATGAACTGCTCGGTCAGTAAGCGCTGCACGGCATCCTGGCGGTTGGCGAACGGTTCGGGTTGCTGGGCTTCAAGGCGGTG > 6:139549/1‑110 GCTCACCACAAAGCGCGGAAAGGTGATGAACTGCTCGGTCAGTAAGCGCTGCACGGCATCCTGGCGGTTGGCGAACGGTTCGGGTTGCTGGGCTTCAAGGCG > 7:180304/1‑102 GCTCACCACAAAGCGCGGAAAGGTGATGAACTGCTCGGTCAGTAAGCGCTGCACGGCATCCTGGCGGTTGGCGAACGGTTCGGGTTGCTGGGCTTCAAGGCG < 8:180304/102‑1 CGCGGAAAGGTGATGAACTGCTCGGTCAGTAAGCGCTGCACGGCATCCTGGCGGTTGGCGAACGGTTCGGGTTGCTGGGCTTCAAGGCGGTGGGTGTGATTGCCTTGATCGCAGCGTTGGGCCTGCAGCGCCAAGGCCACCGCCTTGAA < 5:293639/149‑1 AGCGCTGCACGGCATCCTGGCGGTTGGCGAACGGTTCGGGTTGCTGGGCTTCAAGGCGGTGGGTGTGATTGCCTTGATCGCAGCGTTGGGCCTGCAGCGCCAAGGCCACCGCCTTGAAG < 3:297644/119‑1 AGCGCTGCACGGCATCCTGGCGGTTGGCGAACGGTTCGGGTTGCTGGGCTTCAAGGCGGTGGGTGTGATTGCCTTGATCGCAGCGTTGGGCCTGCAGCGCCAAGGCCACCGCCTTGAAG > 4:297644/1‑119 CGGTGGGTGTGATTGCCTTGATCGCAGCGTTGGGCCTGCAGCGCCAAGGCCACCGCCTTGAAGCCCAGCAACCCGAACCGTTCGCCAACCGCCAGGATGCCGTGCAGCGCTTACTGACCGAGCAGTTCATCACCTTTCCGCGCTTTGTG > 5:365542/1‑149 GTGGGTGTGATTGCCTTGATCGCAGCGTTGGGCCTGCAGCGCCAAGGCCACCGCCTTGAAGCCCAGCAACCCGAACCGTTCGCCAACCGCCAGGATGCCGTGCAGCGCTTACTGACCGAGCAGTTCATCACCTTTCCGCGCTTTGTGGT < 2:302095/149‑1 TGGGTGTGATTGCCTTGATCGCAGCGTTGGGCCTGCAGCGCCAAGGCCACCGCCTTGAAGCCCAGCAACCCGAACCGTTCGCCAACCGCCAGGATGCCGTGCAGCGCTTACTGACCGAGCAGTTCATCACCTTTCCGCGCTTTGTGGTG < 8:2138/149‑1 CTCAGTGCCGGTGCTTGTGCCGCTCCCGCCAGGCCCTCCACCAGGCCCCGCTCACCACAAAGCGCGGAAAGGTGATGAACTGCTCGGTCAGTAAGCGCTGCACGGCATCCTGGCGGTTGGCGAACGGTTCGGGTTGCTGGGCTTCAAGGCGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2638733‑2638887‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggtggGTGTGATTGCCTTGATCGCAGCGTTGGGCCTGCAGCGCCAAGGCCACCGCCTTGAAGCCCAGCAACCCGAACCGTTCGCCAACCGCCAGGATGCCGTGCAGCGCTTACTGACCGAGCAGTTCATCACCTTTCCGCGCTTTGTGGTG < NC_002947/2638930‑2638785 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |