| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2910557 | 55 (0.860) | 4 (0.070) | 4/240 | NT | 6.8% | intergenic (‑120/‑424) | aprDA/PP_2561 | alkaline protease secretion ABC transporter ATP‑binding protein/hemolysin‑type calcium‑binding bacteriocin |
| ? | NC_002947 | = 2910573 | 58 (0.960) | intergenic (‑136/‑408) | aprDA/PP_2561 | alkaline protease secretion ABC transporter ATP‑binding protein/hemolysin‑type calcium‑binding bacteriocin | |||||
AAAGCGGGAAGCCCTTGCGGCGCCCCGTACAACGGCTGTTGTGGATTTTTGGTCGGCTCGCAGGCGGGTCGCACTGATGGCGATATT‑GCCCAAACGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2910458‑2910557‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgctgcTGTCTGTGGGAGCAACGCAGCGTTTGGGCAATATCGCCATCAGTGCGACCCGCCTGCGAGCCGACCAAAAATCCACAACAGCCGTTGTACGGGGCGCCGCAAGGGCTTCCCGCTTTGTGATAAAGGGAGGCCTCCGATGCCTAA < NC_002947/2910573‑2910430 AAAGCGGGAAGCCCTTGCGGCGCCCCGTACAACGGCTGTTGTGGATTTTTGGTCGGCTCGCAGGCGGGTCGCACTGATGGCGAAATT‑GCCCAAACGCTGCTGTCTGTGGGAGCAACGCAGCGTTTG > 7:235809/1‑126AAAGCGGGAAGCCCTTGCGGCGCCCCGTACAACGGCTGTTGTGGATTTTTGGTCGGCTCGCAGGCGGGTCGCACTGATGGCGAAATT‑GCCCAAACGCTGCTGTCTGTGGGAGCAACGCAGCGTTTG < 8:235809/126‑1 GGCGCCCCGTACAACGGCTGTTGTGGATTTTTGGTCGGCTCGGAGGCGGGTCGCACTGATGGGGATATTGGCCAAAACGCTGCTGTCTGTGGGAGCAACGCAGCGTTTGG < 1:60587/110‑1 GGCGCCCCGTACAACGGCTGTTGTGGAATTTTGGTCGGCTCGCAGGCGGGTCGCACTGATGGCGATATT‑GCCCAAACGCTGCTGTCTGTGGGAGCAAAGCAGCGTTTGG > 2:60587/1‑109 GCTGCTGTCTGTGGGAGCAACGCAGCGTTTGGGCAATATCGCCATCAGTGCGACCCGCCTGCGAGCCGACCAAAAATCCACAACAGCCGTTGTACGGGGCGCCGCAAGGGCTTCCCGCTTTGTGATAAAGGGAGGCCTCCGATGCCTAA < 6:249711/149‑1 GCTGCTGTCTGTGGGAGCAACGCAGCGTTTGGGCAATATCGCCATCAGTGCGACCCGCCTGCGAGCC > 3:125919/1‑67 AAAGCGGGAAGCCCTTGCGGCGCCCCGTACAACGGCTGTTGTGGATTTTTGGTCGGCTCGCAGGCGGGTCGCACTGATGGCGATATT‑GCCCAAACGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2910458‑2910557‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgctgcTGTCTGTGGGAGCAACGCAGCGTTTGGGCAATATCGCCATCAGTGCGACCCGCCTGCGAGCCGACCAAAAATCCACAACAGCCGTTGTACGGGGCGCCGCAAGGGCTTCCCGCTTTGTGATAAAGGGAGGCCTCCGATGCCTAA < NC_002947/2910573‑2910430 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |