New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2912407 | 59 (0.920) | 7 (0.120) | 5/236 | NT | 10.2% | coding (1427/10827 nt) | PP_2561 | hemolysin‑type calcium‑binding bacteriocin |
? | NC_002947 | = 2912439 | 69 (1.160) | coding (1459/10827 nt) | PP_2561 | hemolysin‑type calcium‑binding bacteriocin |
GGCCGGGTGAACGAGAACATCGGCCTGACCGCCGTGCACCATGTGTTCCACTCCGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2912253‑2912407 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccatcccACACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGGATGGCGGTTACGTCGTCGATCAGCCACTCATTGAGGAACGCCAGGTCGCCCGCGGCCAGCAGGGTGTCCTTGGTCTGCTGCACCAGGCGGTTGTGCTCGGAGTGGAACACATG < NC_002947/2912439‑2912292 GGCCGGGTGAACGAGAACATCGGCCTGACCGCCGTGCACCATGTGTTCCACTCCGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGC > 8:129003/1‑149 CGGGTGAACGAGAACATCGGCCTGACCGCCGTGCACCATGTGTTCCACTCCGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCAT > 3:383632/1‑149 ACGAGAACATCGGCCTGACCGCCGTGCACCATGTGTTCCACTCCGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCACAC > 8:81529/1‑149 ATCGGCCTGACCGCCGTGCACCATGTGTTCCACTCCGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCACACCAGCGCGG > 5:390108/1‑149 TGTGTTCCACTCCGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCACACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGG < 6:390108/149‑1 GTGTACCACGCCGAGCACTCCCGGCTGGTGCAGGAGTCCAAGGACACCCAGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCACACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGGA < 7:145671/149‑1 TGTTCCACTCCGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCACACCAGCGCGGCGATGTCTGCAGGCGTGGTGGGGA < 4:264740/148‑1 CCACTCCGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCACACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGGATGGC < 7:81529/148‑1 ACTCCGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCACACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGGATGGC > 5:221367/1‑146 ACTCCGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCCACACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGGATGGC < 6:221367/146‑1 ATCCCACACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGGATGGCGGTTACGTCGTCGATCAGCCACTCATTGAGGAACGCCAGGTCGCCCGCGGCCAGCAGGGTGTCCTTGGTCTGCTGCACCAGGCGGTTGTGCTCGGAGTGGAACA > 4:383632/1‑149 TCCCACACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGGATGGCGGTTACGTCGTCGATCAGCCACTCATTGAGGAACGCCAGGTCGCCCGCGGCCAGCAGGGTGTCCTTGGTCTGCTGCACCAGGCGGTTGTGCTCGGAGTGGAACAC < 8:60843/149‑1 CCACACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGGATGGCGGTTACGTCGTCGATCAGCCACTCATTGAGGAACGCCAGGTCGCCCGCGGCCAGCAGGGTGTCCTTGGTCTGCTGCACCAGGCGGTTGTGCTCGGAGTGGAACACAT > 5:159075/1‑149 CCACACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGGATGGCGGTTACGTCGTCGATCAGCCACTCATTGAGGAACGCCAGGTCGCCCGCGGCCAGCAGGGTGTCCTTGGTCTGCTGCACCAGGCGGTTGTGCTCGGAGTGGAACACAT < 5:185560/149‑1 CACACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGGATGGCGGTTACGTCGTCGATCAGCCACTCATTGAGGAACGCCAGGTCGCCCGCGGCCAGCAGGGTGTCCTTGGTCTGCTGCACCAGGCGGTTGTGCTCGGAGTGGAACACATG < 3:233392/149‑1 CACACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGGATGGCGGTTACGTCGTCGATCAGCCACTCATTGAGGAACGCCAGGTCGCCCGCGGCCAGCAGGGTGTCCTTGGTCTGCTGCACCAGGCGGTTGTGCTCGGAGTGGAACACATG < 3:293418/149‑1 GGCCGGGTGAACGAGAACATCGGCCTGACCGCCGTGCACCATGTGTTCCACTCCGAGCACAACCGCCTGGTGCAGCAGACCAAGGACACCCTGCTGGCCGCGGGCGACCTGGCGTTCCTCAATGAGTGGCTGATCGACGACGTAACCGCCATCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2912253‑2912407 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccatcccACACCAGCGCGGCGATGTCGGCAGGCGTGGTGGGGATGGCGGTTACGTCGTCGATCAGCCACTCATTGAGGAACGCCAGGTCGCCCGCGGCCAGCAGGGTGTCCTTGGTCTGCTGCACCAGGCGGTTGTGCTCGGAGTGGAACACATG < NC_002947/2912439‑2912292 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |