| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2948802 = | 60 (0.940) | 5 (0.080) | 4/240 | NT | 8.6% | coding (280/591 nt) | PP_2582 | heme oxygenase |
| ? | NC_002947 | 2948842 = | 49 (0.810) | coding (240/591 nt) | PP_2582 | heme oxygenase | |||||
CGTTATGGGCGCTTCCTGCAGGTGCAGCACCGCTTTCATGGCAGCCTGTTGGCGTTGTATCAGGATGAACAGCTCAACCAGCAACTGCCGGGGCTGGCGGCGCTGTCACGGTTCGCGGCAGTCGAGGCCGACCTGCGCGACCTCGGCCTGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2948955‑2948802‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccgcGAACCGTGACAGCGCCGCCAGCCCCGGCAGTTGCTGGTTGAGCTGTTCATCCTGATACAACGCCAACAGGCTGCCATGAAAGCGGTGCTGCACCTGCAGGAAGCGCCCATAACGCTCGCGGCTCTCGAAAGGCCGCGCTGCCATCAC > NC_002947/2948842‑2948988 CGTTATGGGCGCTTCCTGCAGGTGCAGCACCGCTTTCATGGCAGCCTGTTGGCGTTGTATCAGGATGAACAGCTCAACCAGCAACTGCCGGGGCTGGCGGCGCTGTCACGGTTCGCGGCAGTCGAGGCCGACCTGCGCGACCTCGGCC < 4:340112/148‑1 GCAGCACCGCTTTCATGGCAGCCTGTTGGCGTTGTATCAGGATGAACAGCTCAACCAGCAACTGCCGGGGCTGGCGGCGCTGTCACGGTTCGCGGCAGTCGAGGCCGACCTGCGCGACCTCGGCCTG > 1:32483/1‑127 GCAGCACCGCTTTCATGGCAGCCTGTTGGCGTTGTATCAGGATGAACAGCTCAACCAGCAACTGCCGGGGCTGGCGGCGCTGTCACGGTTCGCGGCAGTCGAGGCCGACCTGCGCGACCTCGGCCTG < 2:32483/127‑1 GCGGCAGTCGAGGCCGACCTGCGCGACCTCGGCCTGCCGCGAACCGTGACAGCGCCGCCAGCCCCGGCAGTTGCTGGTTGAGCTGTTCATCCTGATACAACGCCAACAGGCTGCCATGAAAGCGGTGCTGCACCTGCAGGAAGCGCCCA > 3:310167/1‑149 GCGGCAGTCGAGGCCGACCTGCGCGACCTCGGCCTGCCGCGAACCGTGACAGCGCCGCCAGCCCCGGCAGTTGCTGGTTGAGCTGTTCATCCTGATACAACGCCAACAGGCTGCCATGAAAGCG > 7:184045/1‑124 GCGGCAGTCGAGGCCGACCTGCGCGACCTCGGCCTGCCGCGAACCGTGACAGCGCCGCCAGCCCCGGCAGTTGCTGGTTGAGCTGTTCATCCTGATACAACGCCAACAGGCTGCCATGAAAGCG < 8:184045/124‑1 TCGAGGCCGACCTGCGCGACCTCGGCCTGCCGCGAACCGTGACAGCGCCGCCAGCCCCGGCAGTTGCTGGTTGAGCTGTTCATCC < 5:55100/85‑1 TCGAGGCCGACCTGCGCGACCTCGGCCTGCCGCGAACCGTGACAGCGCCGCCAGCCCCGGCAGTTGCTGGTTGAGCTGTTCATCC > 6:55100/1‑85 GGCCTGCCGCGAACCGTGACAGCGCCGCCAGCCCCGGCAGTTGCTGGTTGAGCTGTTCATCCTGATACAACGCCAACAGGCTGCCATGAAAGCGGTGCTGCACCTGCAGGAAGCGCCCATAACGCTCGCGGCTCTCGAAAGGCCGCGC < 4:310167/148‑1 CCGCGAACCGTGACAGCGCCGCCAGCCCCGGCAGTTGCTGGTTGAGCTGTTCATCCTGATACAACGCCAACAGGCTGCCATGAAAGCGGTGCTGCACCTGCAGGAAGCGCCCATA > 5:37612/1‑115 CCGCGAACCGTGACAGCGCCGCCAGCCCCGGCAGTTGCTGGTTGAGCTGTTCATCCTGATACAACGCCAACAGGCTGCCATGAAAGCGGTGCTGCACCTGCAGGAAGCGCCCATA < 6:37612/115‑1 CGAACCGTGACAGCGCCGCCAGCCCCGGCAGTTGCTGGTTGAGCTGTTCATCCTGATACAACGCCAACAGGCTGCCATGAAAGCGGTGCTGCACCTGCAGGAAGCGCCCATAACGCTCGCGGCTCTCGAAAGGCCGCGCTGCCATCAC > 2:56002/1‑148 CGTTATGGGCGCTTCCTGCAGGTGCAGCACCGCTTTCATGGCAGCCTGTTGGCGTTGTATCAGGATGAACAGCTCAACCAGCAACTGCCGGGGCTGGCGGCGCTGTCACGGTTCGCGGCAGTCGAGGCCGACCTGCGCGACCTCGGCCTGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2948955‑2948802‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccgcGAACCGTGACAGCGCCGCCAGCCCCGGCAGTTGCTGGTTGAGCTGTTCATCCTGATACAACGCCAACAGGCTGCCATGAAAGCGGTGCTGCACCTGCAGGAAGCGCCCATAACGCTCGCGGCTCTCGAAAGGCCGCGCTGCCATCAC > NC_002947/2948842‑2948988 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |