New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2987610	NA (NA)	4 (0.070)	4/240	NT	NA	coding (789/2991 nt)	PP_2612	membrane protein
	?	NC_002947	= 2987639	NA (NA)					coding (760/2991 nt)	PP_2612	membrane protein

CAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2987460‑2987610 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcggccTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAGCACACAAAACCTGCCCAACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCACCATCGC  <  NC_002947/2987639‑2987493                                                                                                                                                                                                                                                                                                            CAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGG                                                                                                                                                       >  5:253647/1‑149  AGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGC                                                                                                                                                      >  3:329510/1‑149              AGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGC                                                                                                                                                      >  1:241258/1‑137              AGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGC                                                                                                                                                      <  2:241258/137‑1                             AGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGCC                                                                                                                                                     >  8:195851/1‑123                             AGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGCC                                                                                                                                                     <  7:195851/123‑1                                      TGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGA                                                                                                                  <  2:244335/149‑1                                           AAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAAC                                                                                                             <  2:340961/149‑1                                                       CTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACT                                                                                                            >  5:263875/1‑138                                                       CTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACT                                                                                                            <  6:263875/138‑1                                                                                                                                                  TCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAGCACACAAAACCTGCCCAACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCACCA      >  5:10734/1‑149                                                                                                                                                  TCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAGCACACAAAACC                                                                                             >  2:355718/1‑62                                                                                                                                                  TCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAGCACACAAAACC                                                                                             <  1:355718/62‑1                                                                                                                                                  TCGGCCTACCAGCATCAACTGCGTGACCAGATGCCGGCCGAGCAACTGGAGCACACAAAACCTGCCCAACCTCCAGAGCATGAGCGCGTGCCGGCATGCTACCCGCTGGATCCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCACC       >  1:233262/1‑148                                                                                                                                                     GCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAGCACACAAAACCTGCCCAACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCACCATCG   >  4:332333/1‑149                                                                                                                                                      CCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAGCACACAAAACCTGCCCAACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCACCATCG   >  5:254478/1‑148                                                                                                                                                       CTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAGCACACAAGACCTGCCCAACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCACCATCGC  >  3:355085/1‑148                                                                                                                                                                                                                                                                                                            CAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2987460‑2987610 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcggccTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAGCACACAAAACCTGCCCAACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCACCATCGC  <  NC_002947/2987639‑2987493

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.