| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3020901 = | 38 (0.590) | 4 (0.070) | 4/240 | NT | 9.3% | coding (1439/3519 nt) | PP_2638 | cellulose synthase operon protein C |
| ? | NC_002947 | 3020955 = | 42 (0.690) | coding (1493/3519 nt) | PP_2638 | cellulose synthase operon protein C | |||||
CCGGATCACGTGGCTGGTGCTGCACCAGCCTGGCAAATGCCGCGTCGGCCTCGCCAGTGCGCCCTTGGTGACGCAGACTGTTGGCCAGCTGATACACCAGCCAAGGCTCATCGGGGGCCAGGGCCGAAGCCTGGCCCAGCACGTGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3021050‑3020901‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctggTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATG > NC_002947/3020955‑3021098 CCGGATCACGTGGCTGGTGCTGCACCAGCCTGGCAAATGCCGCGTCGGCCTCGCCAGTGCGCCCTTGGTGACGCAGACTGTTGGCCAGCTGATACACCAGCCAAGGCTCATCGGGGGCCAGGGCCGAAGCCTGGCCCAGCACGTGGCTG > 6:31633/1‑149 CCGCGTCGGCCTCGCCAGTGCGCCCTTGGTGACGCAGACTGTTGGCCAGCTGATACACCAGCCAAGGCTCATCGGGGGCCAGGGCCGAAGCCTGGCCCAGCACGTGG > 3:367681/1‑107 CCGCGTCGGCCTCGCCAGTGCGCCCTTGGTGACGCAGACTGTTGGCCAGCTGATACACCAGCCAAGGCTCATCGGGGGCCAGGGCCGAAGCCTGGCCCAGCACGTGG > 3:373746/1‑107 CCGCGTCGGCCTCGCCAGTGCGCCCTTGGTGACGCAGACTGTTGGCCAGCTGATACACCAGCCAAGGCTCATCGGGGGCCAGGGCCGAAGCCTGGCCCAGCACGTGG < 4:367681/107‑1 CCGCGTCGGCCTCGCCAGTGCGCCCTTGGTGACGCAGACTGTTGGCCAGCTGATACACCAGCCAAGGCTCATCGGGGGCCAGGGCCGAAGCCTGGCCCAGCACGTGG < 4:373746/107‑1 GCTGATACACCAGCCAAGGCTCATCGGGGGCCAGGGCCGAAGCCTGGCCCAGCACGTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGG > 7:44695/1‑111 GCTGATACACCAGCCAAGGCTCATCGGGGGCCAGGGCCGAAGCCTGGCCCAGCACGTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGG < 8:44695/111‑1 ACCAGCCAAGGCTCATCGGGGGCCAGGGCCGAAGCCTGGCCCAGCACGTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCC < 1:375361/149‑1 ACCAGCCAAGGCTCATCGGGGGCCAGGGCCGAAGCCTGGCCCAGCACGTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCC > 2:375361/1‑149 GCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATG > 8:93991/1‑149 GCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGAT < 5:390877/148‑1 GCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGAT < 5:62811/148‑1 CCGGATCACGTGGCTGGTGCTGCACCAGCCTGGCAAATGCCGCGTCGGCCTCGCCAGTGCGCCCTTGGTGACGCAGACTGTTGGCCAGCTGATACACCAGCCAAGGCTCATCGGGGGCCAGGGCCGAAGCCTGGCCCAGCACGTGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3021050‑3020901‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctggTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATG > NC_002947/3020955‑3021098 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |