New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3293731	67 (1.050)	5 (0.080)	4/246	NT	7.4%	coding (3015/3675 nt)	PP_2893	hypothetical protein
	?	NC_002947	= 3293766	61 (0.980)					coding (3050/3675 nt)	PP_2893	hypothetical protein

CGGCAAGGTGCAGGTACCCAAGGGCAAGATCACTGTACGTGAGCTGCCGCCGTCCACGGTCAAGGTGTCGGATGACACGGTAATCGTCGGTCATCAGACCGAGGAAGGCAAACCCCCCATGGCCATGGCCATGGACATCGATGTCGAAGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3293581‑3293731 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtcAGCCCGAAACCGCTGAACGACAGCTTGTCGCGGCCGACTTCGACATCGATGTCCATGGCCATGGCCATGGGGGGTTTGCCTTCCTCGGTCTGATGACCGACGATTACCGTGTCATCCGACACCTTGACCGTGGACGGCGGCAGCTCA  <  NC_002947/3293766‑3293620                                                                                                                                                                                                                                                                                                            CGGCAAGGTGCAGGTACCCAAGGGCAAGATCACTGTACGTGAGCTGCCGCCGTCCACGGTCAAGGTGTCGGATGACACGGTAATCGTCGGTCATCAGACCGAGGAAGGCAAACCCCCCATGGCCATGGCCATGGACATCGATGTCGAAG                                                                                                                                                       >  4:217622/1‑149   GCAAGGTGCAGGTACCCAAGGGCAAGATCACTGTACGTGAGCTGCCGCCGTCCACGGTCAAGGTGTCGGATGACACGGTAATCGTCGGTCATCAGACCGAGGAAGGCAAACCCCCCATGGCCATGGCCATGGACATCGATGTCGAAGT                                                                                                                                                      >  4:364222/1‑148                                           GCTGCCGCCGTCCACGGTCAAGGTGTCGGATGACACGGTAATCGTCGGTCATCAGACCGAGGAAGGCAAACCCCCCATGGCCATGGCCATGGACATCGATGTCGAAGTCAGCCCGAAACCGCTGAACGACAGCTTGTCGCGGCCGACTT                                                                                                             <  3:364222/149‑1                                                            TCAAGGTGTCGGATGACACGGTAATCGTCGGTCATCAGACCGAGGAAGGCAAACCCCCCATGGCCATGGCCATGGACATCGATGTCGAAGTCAGCCCGAAACCGCTGAACGACAGCTTGTCGCGGCCGA                                                                                                                <  5:82625/129‑1                                                            TCAAGGTGTCGGATGACACGGTAATCGTCGGTCATCAGACCGAGGAAGGCAAACCCCCCATGGCCATGGCCATGGACATCGATGTCGAAGTCAGCCCGAAACCGCTGAACGACAGCTTGTCGCGGCCGA                                                                                                                >  6:82625/1‑129                                                                 GTGTCGGATGACACGGTAATCGTCGGTCATCAGACCGAGGAAGGCAAACCCCCCATGGCCATGGCCATGGACATCGATGTCGAAGTCAGCCCGAAACCGCTGAACGACAGCTTGTCGCGGCCGACTT                                                                                                             >  5:405590/1‑127                                                                 GTGTCGGATGACACGGTAATCGTCGGTCATCAGACCGAGGAAGGCAAACCCCCCATGGCCATGGCCATGGACATCGATGTCGAAGTCAGCCCGAAACCGCTGAACGACAGCTTGTCGCGGCCGACTT                                                                                                             <  6:405590/127‑1                                                                                                                                                      TCAGCCCGAAACCGCTGAACGACAGCTTGTCGCGGCCGACTTCGACATCGATGTCCATGGCCATGGCCATGGGGGGTTTGCCTTCCTCGGTCTGATGCCCGACGATTACCGTGTCATCCGACACCTTGACCGGGGACGGCGGCAGCTCA  >  2:333200/1‑149                                                                                                                                                      TCAGCCCGAAACCGCTGAACGACAGCTTGTCGCGGCCGACTTCGACATCGATGTCCATGGCCATGGCCATGGGGGGTTTGCCTTCCTCGGTCTGATGACCGACGATTACCGTGTCATCCGACACCTTGACCGTGGACGGCGGCAGCTCA  >  5:348634/1‑149                                                                                                                                                                                                                                                                                                            CGGCAAGGTGCAGGTACCCAAGGGCAAGATCACTGTACGTGAGCTGCCGCCGTCCACGGTCAAGGTGTCGGATGACACGGTAATCGTCGGTCATCAGACCGAGGAAGGCAAACCCCCCATGGCCATGGCCATGGACATCGATGTCGAAGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3293581‑3293731 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtcAGCCCGAAACCGCTGAACGACAGCTTGTCGCGGCCGACTTCGACATCGATGTCCATGGCCATGGCCATGGGGGGTTTGCCTTCCTCGGTCTGATGACCGACGATTACCGTGTCATCCGACACCTTGACCGTGGACGGCGGCAGCTCA  <  NC_002947/3293766‑3293620

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.